| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2341 |
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| Symbol | |
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| ID | 6159718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2543595 |
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| End bp | 2544368 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641665110 |
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| Product | WecB/TagA/CpsF family glycosyl transferase |
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| Protein accession | YP_001791371 |
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| Protein GI | 171059022 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1922] Teichoic acid biosynthesis proteins |
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| TIGRFAM ID | [TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 126 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTGATA AGGCGATCCC TTGTGTAGAG CTTGAAGGGG TGCCATTTAG CTGCCTCGGG
TTGGCTGAGA CTGGACGTTA TATTGTTGAG GCAGCCAAGG AGGGAAGGGG AGGCTGGGTC
GTAACTCCGA ATGTTGATAT TGTTAGGCGC ATTGTTCGCG ATGCGTTATT TAAGCATCTT
GTTTCTTCTG CAGATATTTT TACCCCGGAT GGGGCCCCGA TCGTTTGGGC TGCGCGTCTC
CGAGGCGATA AGTTGGCAGA ACGGGTTCCG GGCTCTGATT TGTTTTTAAG TGTTTGTGAA
AAAAGTGCCC GAGGTGGATT GCCAGTCGCA CTTATTGGAG GTAATCCGGG AGTGGCTGAG
GCGGCGGCGA TTATATTGAG GGATCGATAC CCTCTGCTTG AAGTTGCTGG TAGTGTGTGT
CCAGAATTTG GGTTCGAGAA AGATGAGCGT CAACTGACTG AGTTAGATGA ATTCGTTCGA
CACAGCTCTG CTCGGATAGT ATTTGTTGGT CTGGGTTCGC CAAAGCAAGA GCATCTGATT
TCTAGGCTTC GGGGTATTCG TTCGGATATT TGGTGGATTG GGGTGGGTGT AACTTTTAGT
TTTGTGGCTG GGGAGATGGC GCGCGCACCC AAGTGGATGC AGGTTATTGG TCTTGAATGG
TTGCATCGAA TGGTGCTTGA ACCTCGACGA CTGATTCGTA GATATTTGAT TGATGATTTG
CCGTTTGCTT TAGTAATGTT GTTGAAGGCT GTTATTTACA GAATTTTGCG CTAA
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| Protein sequence | MVDKAIPCVE LEGVPFSCLG LAETGRYIVE AAKEGRGGWV VTPNVDIVRR IVRDALFKHL
VSSADIFTPD GAPIVWAARL RGDKLAERVP GSDLFLSVCE KSARGGLPVA LIGGNPGVAE
AAAIILRDRY PLLEVAGSVC PEFGFEKDER QLTELDEFVR HSSARIVFVG LGSPKQEHLI
SRLRGIRSDI WWIGVGVTFS FVAGEMARAP KWMQVIGLEW LHRMVLEPRR LIRRYLIDDL
PFALVMLLKA VIYRILR
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