| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2339 |
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| Symbol | |
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| ID | 6160121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2539047 |
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| End bp | 2539940 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641665108 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791369 |
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| Protein GI | 171059020 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain
[TIGR03370] variant PEP-CTERM putative exosortase signal, Roseobacter type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 124 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAC GCCTTGCCGC CCTGGCCGCC ATGATGGTCA TCGGCGCAGC GCCCGCTCAC
GCGGTGTCGT CTTCGTCGGC ATCCTTCACC GACATCACGT TCCAGCTGGT TGACCTCAAT
CCTCTGGACG CGCTCACGCC GTACCTCACG TTCATCAATG GCAGCTCGGC TGCCAGCACG
GTGAGCACCA ACGTCAGCCT CAACGATCCT GACACCGGCT CCGATGGCGG CAGCAACACC
AAGACGGGTG TGCGATCGAC CACTTCCAAG TCGTCGTCGC AAGACTTCGG CGCAACCACT
GCCAATGCCT CCGTCGTTGG CAACAATGCC ACCACGCTCA ACGGCGCCGG CACCTACACC
AGCGCCCTTT CGTCGGTGTC TGCGAGCGGT TCTGCCTACA GCCCGACCGC GGGCGGCTAC
GCCAGCTACA GCGCAACCGC TCAAGTTCCC AACTACTGGT ACTCGTCCAA CTTCCTGCTG
AGCGCAAACA CGATCCTGAT CGTGACGGCC AATGGGGCTG CTTCCGCGCA AAATTCGGTC
GGTTACGATG GCTTGACTGG CAGTTCTGAA AACTCGTATG CGCAACTCAG TTTCAACCTG
AGCGGTTCCG GGCCGTCGGG TTCGGGTAGC CAGGGCGCCA GCGATTCGAT CTCTCTCTAC
AACTACTACT GGTACGGCAC CGGTGCACAA AGCGACGCCC GCGTCATGGG CGGTGCTTTC
ACGAACCTCA GCAACGTCGA CCTCTATGGC ACGCTGTCGC TGCAGGCCAC CGTCTCCGGT
GACTCGAGCG TGGTTTCCCT GCCCGCCCCG GTTCCTGAGC CCGAAAGCTA CGCCATGATG
CTGGCCGGCC TCGGTGCCAT CGGCGCCATG GCTCGCCGCC GCAAGCAGAA GTAA
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| Protein sequence | MKLRLAALAA MMVIGAAPAH AVSSSSASFT DITFQLVDLN PLDALTPYLT FINGSSAAST
VSTNVSLNDP DTGSDGGSNT KTGVRSTTSK SSSQDFGATT ANASVVGNNA TTLNGAGTYT
SALSSVSASG SAYSPTAGGY ASYSATAQVP NYWYSSNFLL SANTILIVTA NGAASAQNSV
GYDGLTGSSE NSYAQLSFNL SGSGPSGSGS QGASDSISLY NYYWYGTGAQ SDARVMGGAF
TNLSNVDLYG TLSLQATVSG DSSVVSLPAP VPEPESYAMM LAGLGAIGAM ARRRKQK
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