Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2327 |
Symbol | |
ID | 6161107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2526785 |
End bp | 2527405 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641665096 |
Product | hypothetical protein |
Protein accession | YP_001791357 |
Protein GI | 171059008 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 122 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCCA TCGCCACCAC AGCCTTGTCG GCAGCAGGCG CGGCGCAGGC CCAGACCACC CTCACCGAAG ACTTCAACCA CGGCGTCAGC CTGGTCGGTG GCGCCTACCG CGGCAACAAC ACCGTGTCGG GATGGCTCAG CACGGGCACG GCCGACGCCG TGAGCGTCGG TGGCGCCAAC AGCGCCAATG CCGACAACTT CATCAGCCTG GCCAACGGTG GCGCCCTCAC CTACGGGTTC GCGCTGTCCG GCACGTCGGA TCTGGACCTG TCGTTCTGGT ACACGCGCTC ATCGAGCGAC AACAGCTTCA TCGCCAGCGT GACACTGACC GGCCAGACAC CGATCGTGCT GCTGCGCGAC GGCACCCACA GCGGCAACCC CGGCGCCGAT CAGAACAAGA CCGCGCAATA CGGCACCACG TTCAGCGGGC TTGCCGCGGG CGACTACAGC CTGACCTTCA ACTACACGGG CACCGCGCGC GGCAACTCGG TCTTCCAGTT CGACGATGTC GCCATGACGA TCAGCGCCGT GCCGGAACCG CAGCCCTACG CCCTGCTGCT GGCCGGGCTG GGCGCCGTCG GATTCATGGC TCGCCGCCGC CGCCGCACCG ATCCGACCTG A
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Protein sequence | MAAIATTALS AAGAAQAQTT LTEDFNHGVS LVGGAYRGNN TVSGWLSTGT ADAVSVGGAN SANADNFISL ANGGALTYGF ALSGTSDLDL SFWYTRSSSD NSFIASVTLT GQTPIVLLRD GTHSGNPGAD QNKTAQYGTT FSGLAAGDYS LTFNYTGTAR GNSVFQFDDV AMTISAVPEP QPYALLLAGL GAVGFMARRR RRTDPT
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