| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2323 |
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| Symbol | |
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| ID | 6163636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2522888 |
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| End bp | 2524210 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641665092 |
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| Product | nucleotide sugar dehydrogenase |
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| Protein accession | YP_001791353 |
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| Protein GI | 171059004 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 107 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCA CCGTCGTCGG CACTGGGTAT GTGGGGTTGG TCACGGGCGC CTGCCTGTCG
GAAATGGGCA ACCACGTGTT GTGCCTGGAT CTGGACGCCG ACAAGATCAA GACGCTCAAC
GAAGGTGGCA TCCCGATCCA CGAGCCGGGT CTGCTGGAGG TGGTGCGCAA CAACGTGGCG
GCCGGCCGGC TGCAGTTCAC CACCGACGTG GAACGCGCGG TGTCGCACGG CACGATCCAG
TTCATCGCGG TCGGCACGCC GCCCGATGAG GATGGCTCGG CCGACCTGAA GTACGTGCTG
GCGGCGGCCC GCGCCATCGG CCGCACGATG ACCGACTTCA AGGTGATCGT CGACAAGAGC
ACCGTGCCGG TGGGCACCGG CGACAAGGTG CAGGCCGCCG TGGCCGACGA GATCGCCAAG
CGCGGCATCA AGCTCGATTT CGCGGTGTGC TCGAACCCCG AGTTCCTGAA AGAGGGCGCG
GCGGTCAAGG ATTTCATGAG TCCGGACCGC GTGGTGGTGG GTGCGGACGA CGAGCGCGCG
ATCCTGCTGA TGCGCGCGCT GTATTCGCCG TTCACGCGCA ACCGCGATCG CATGATGGTG
ATGGACATCA AGAGCGCCGA ATTCACCAAG TACGCCGCCA ACGCGATGCT GGCCACCCGC
ATCAGCTTCA TGAACGAGCT GTCGCGTCTG GCCGAGGTGA TGGGCGCCGA CATCGAACTG
GTGCGCCAGG GCATCGGCTC GGATCCGCGC ATCGGCACGC ACTTCCTGTA CGCCGGTGCG
GGTTACGGCG GCAGCTGTTT CCCCAAGGAC GTCAAGGCGC TGGCCAAGAC CTCGGCCGAT
GCCGGCCTGC CGAGCAAGAT GCTGGAGGCG GTCGAGGCCG TCAACGACGA ACAGAAGCTG
GTGCTCGTCA ACAAGGTGGT CGCCAAGTAC GGCGAGGACC TGAGCGGGCG CACCTTCGCG
CTCTGGGGCC TGGCCTTCAA GCCCAACACC GACGACATGC GCGAGGCTCC CAGCCGCGTG
ATCATCGAGG AACTCAACCG CCGCGGTGCC CGCATCCAGG CCTATGACCC GGTGGCGATG
CACGAGGCCA GCCGCGTGAT GCCCGCCAGC GCGCAGCTCG CCTACGCCAG TGGCGCCAGC
GCCGCGCTCG AAGGCGCCGA CGCGCTGATC ATCGTCACCG AGTGGAAGGA GTTCCGCACG
CCCGATTTCG ACGGCATCCG CGATGCGCTC AAGGACAAGC GTGTGTTCGA CGGCCGCAAC
CTGTACGAGC CGGCGCTGAT CCGCGCGATG GGGCTGGAAT ACCACTGCAT CGGGCGGCCG
TGA
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| Protein sequence | MKVTVVGTGY VGLVTGACLS EMGNHVLCLD LDADKIKTLN EGGIPIHEPG LLEVVRNNVA
AGRLQFTTDV ERAVSHGTIQ FIAVGTPPDE DGSADLKYVL AAARAIGRTM TDFKVIVDKS
TVPVGTGDKV QAAVADEIAK RGIKLDFAVC SNPEFLKEGA AVKDFMSPDR VVVGADDERA
ILLMRALYSP FTRNRDRMMV MDIKSAEFTK YAANAMLATR ISFMNELSRL AEVMGADIEL
VRQGIGSDPR IGTHFLYAGA GYGGSCFPKD VKALAKTSAD AGLPSKMLEA VEAVNDEQKL
VLVNKVVAKY GEDLSGRTFA LWGLAFKPNT DDMREAPSRV IIEELNRRGA RIQAYDPVAM
HEASRVMPAS AQLAYASGAS AALEGADALI IVTEWKEFRT PDFDGIRDAL KDKRVFDGRN
LYEPALIRAM GLEYHCIGRP
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