| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2202 |
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| Symbol | |
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| ID | 6160584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2401080 |
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| End bp | 2403605 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664971 |
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| Product | fibronectin type III domain-containing protein |
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| Protein accession | YP_001791233 |
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| Protein GI | 171058884 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.536559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA CTCTGCTGGC ACTCCTCGCC GTCACGGCAC TCGACATGTT CGCCGCCCAG
GCCGCCATGG CCCAGGCCGC ATCCTGCGCC CTGGCCAACG GCGGCAACGG CGCGAGCCCG
ATCTCGACCG GCCCGACCAA CACGCTCAAC GGCTTTTCCA CCTTCGTGGC CAGCGGCGGC
ACCGCGCTCG AGCTGTGCAC CGACCCGGCC TTCTGCTTCT TCGACCCGGT GGTCGAAGGC
AACCTGTTCT CCGAGCAGAT CGGCACCGGC GGCGAATCGT TCTGGTACTC GGCCGATGCC
TTCATCGTCG GCAACAACGG CCTGACGGTG AACTACATCA CCGCCGCCGA AGCGGCCTTC
GCCACCGAAG AGCCGGTGCC GGGCGGCCAG TTCAGCTTCA CCCGCCTGCG CATCCGCATC
GACGTGCCCC AGCCCGGCAT CTACACCCTG GTTCACCCCT ACGGTGAGAA GCAGTGGACG
GTGGACGTGG TCGACGTCGG CAACGAGATC AACGAGACGC TCGACATCAG CTTCACGCCC
AACCTGGCGC AGTCGTCGTC GTTCAACGCC GTCGGCCCGT TCCTGCAGTG GGATGCCACC
GCACCGGCAG CACCGGCCGG TTTCATCGGT GACTTCAACG TCGGCCACAC GGTCACCGGC
AGCCCCTGCA ACACCAACTT CATCCGCCTG AGCGGCACCA ACCTCGACGG CACGCCGATC
GCAGGCGGCA TCGACGGCAG CGGTGCCGAT GCGCTCGAAA GCACCGAGTT CTTCGTGCAG
GGCAAGATCT TCACCGGCCT GTTCCGTGCG CCGCTGGCCG TGCAACGTGC CACCTTCAAC
CGCTCCGACG CGGCTGACGC GCAGCTCGAG GTGTTCGCCA CCGTGCCGGG CGGCATCGCC
ACCACCGCGG TGAGCGTGGC TGAAACCGGC ACCCCGGTGC GCCTGCTGGC ACCCGCGGCA
CTGGCCGGCA ACGTGGTCGA CGGCTTCTTT GCCAGCGCCG CACTGAGCAC GGCCAACCCG
GCGGCGATGC CCAACTCGGT GGCCGTGACG GCTGCCGACA CCGCCGCCGT GGCCGGCGCC
CTGCCGACCA CGCTGCTGGT CAAGGCGGTC GACAACGTCG TCATCACCCA GGCCGACTAC
GACGTCGCCG CCAAGGTGCT GACCGTCAAC GCCACCTCCA GCGACACCCG TGCCGGTGGC
CCGCTGCTGA CGGTGTACGA GACGCAATCG CCGGTCGGCA TCGCACAGAC GACCAACGCC
CCGCCGTTCC AGGTGACGGT GGTGTCGGCT TCGGGCGGCA CCGCCACCGC GACGGTGAAC
GTGGTTGCCA CGCCGCTGCC GCTGGCCCCC ACCGCCCTGA GCGGCACGGC CTCGGCGTTC
AACAGCGTCA GCCTGAGCTG GACCGACGGC TCCACCAACG AAGCCGGTTT CCGCATCAAG
CGCAACGGCG TGGTGGTCGG CACGGTCGGC CCCAACGTGA CCACGTTCGT CAACAACACC
GGCGTGATCG AGAACACCGC CTACAACTAC GAGGTGGTGG CCTACAACGC CGCCGGCGAG
TCGGAAGCGG CAGCGGTTTC GGTGTCGACC CCGGTGGCGC CGCTGAATGC ACCGGCCGTG
ACCTCGCTGA TCGCCCTGAG CAACAGCTCG GTGCGCATCA ACTGGGCCGA CAACTCGAAC
AACGAGGCGG GTTTCCGCGT CGTGCGCACC CGCACCGACG TGGCCAGCGC GCCGGTGACC
ACGCAGCTCG CCGCCGGCGT GATCACGCTG ACGCAGACCG GCCTGGTGGC GGGCGCCACC
TACTCGTACC AGGTGGTGGC TTTCCGCACG CCGGCCAACT CGACCACCGA GCAGACCTCC
GCGTCGGCCG AGTCGACGAT CGCCGTGCCG CTGGGTGCCA CGCTGAACGC CCCGTCGGGC
CTGGCGACCA CGCGCCTGTC GGGCACCTCG GTGCGCCTGC TGTGGGCCGA CCAGTCGAGC
CTGGAGACGG GTTACCGCGT GCAGCGTTCG ACCGCCACCG TGAACGCCAC CACCGGCGTC
ACGACGGCCG GCGCCACGTT CGCGACCACC ACCTCGCCCA ACGGCAACAT CGCGGCCAAC
GCCACCCTGT ACAACAACAC GGGCCTGGCG CAGAACACGA TGTACACCTA CCGGGTGAAC
GCGGTGGACG GCACGACCCA GGGCCCGACC GCGCAGATCT TCTACTACAG CGGCACGCTG
CCGACGGTGA GCGGAACCGG CACCAACGCC ACCACCGTGG TGGGCCGTGT CGTGCCGCGC
TGGACGCGCA GCACCAACGT CGCGGTGGCC GGCTACACGC TGCAGCGCTG CACGTTGAAC
AACACGACCG TCTGCACGGC CGCCGGCCCC TGGACCGACA TCAACATCGC CGGTCGCAAC
ACCAACCTGT ACAACGACGA CGGTCTGGTC ACCGGTCGCC GCTACAGCTA TCGCATCCGC
ACGGTCAACG CCGCGATCAA CCAGGCGGGC AACTACTCGG CCATCTTCAG CGCGCTGGCA
CGCTGA
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| Protein sequence | MKRTLLALLA VTALDMFAAQ AAMAQAASCA LANGGNGASP ISTGPTNTLN GFSTFVASGG
TALELCTDPA FCFFDPVVEG NLFSEQIGTG GESFWYSADA FIVGNNGLTV NYITAAEAAF
ATEEPVPGGQ FSFTRLRIRI DVPQPGIYTL VHPYGEKQWT VDVVDVGNEI NETLDISFTP
NLAQSSSFNA VGPFLQWDAT APAAPAGFIG DFNVGHTVTG SPCNTNFIRL SGTNLDGTPI
AGGIDGSGAD ALESTEFFVQ GKIFTGLFRA PLAVQRATFN RSDAADAQLE VFATVPGGIA
TTAVSVAETG TPVRLLAPAA LAGNVVDGFF ASAALSTANP AAMPNSVAVT AADTAAVAGA
LPTTLLVKAV DNVVITQADY DVAAKVLTVN ATSSDTRAGG PLLTVYETQS PVGIAQTTNA
PPFQVTVVSA SGGTATATVN VVATPLPLAP TALSGTASAF NSVSLSWTDG STNEAGFRIK
RNGVVVGTVG PNVTTFVNNT GVIENTAYNY EVVAYNAAGE SEAAAVSVST PVAPLNAPAV
TSLIALSNSS VRINWADNSN NEAGFRVVRT RTDVASAPVT TQLAAGVITL TQTGLVAGAT
YSYQVVAFRT PANSTTEQTS ASAESTIAVP LGATLNAPSG LATTRLSGTS VRLLWADQSS
LETGYRVQRS TATVNATTGV TTAGATFATT TSPNGNIAAN ATLYNNTGLA QNTMYTYRVN
AVDGTTQGPT AQIFYYSGTL PTVSGTGTNA TTVVGRVVPR WTRSTNVAVA GYTLQRCTLN
NTTVCTAAGP WTDINIAGRN TNLYNDDGLV TGRRYSYRIR TVNAAINQAG NYSAIFSALA
R
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