Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2175 |
Symbol | |
ID | 6163154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2381421 |
End bp | 2382341 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641664943 |
Product | taurine dioxygenase |
Protein accession | YP_001791206 |
Protein GI | 171058857 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2175] Probable taurine catabolism dioxygenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.129597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACCC CCACGTCCAC CGCCACCCTG GCCGCACCGG CCATCGTCAG CGCTGCCGCG CTGCAGCGCT CGATCCACGT CGAGCCGTTG ACCTGCAGCA TCGGCGCCGA ACTGAGCCAC GTCAACCTGG GCGCCGCCTC GCGTGACCCC GATCTGGTCG CCGAGATCCG CGCCCTGCTG CTCAGGCACC GCGTGCTGTT CTTCCGCGAC CAGGACATCA GCCGCGCCGA ACACGTCGCC TTCGCGCGCC ACTTCGGCGA GCTCGAAGAC CACCCGGTGG CCGGCAGCGA CCCGGAACAT CCCGGCCTGG TGCGCATCTA CAAGAACCCC GACCAGCCCG CCGACCGCTA CGAAAACGCC TGGCACACCG ACGCCACCTG GCGCGAGAAG CCGCCGTTCG GCTGCGTGCT GCGCTGCATC GAATGCCCGC CGGTGGGCGG CGACACGATG TGGGCCAACA TGGTGCTGGC CTACGAGCGC CTGCCCGAAC ACGTGAAGAC CCAGATCGCC GGCCTGCGCG CCCGTCACAG CATCGAGGCC AGCTTCGGCG CGGCGATGCC GATCGACAAG CGCCTGGCGC TGAAAGCGCA GTTCCCCGAC GCCGAGCACC CGGTCGTGCG CACGCACCCC GAGACCGGCG AGAAGATCCT GTTCGTCAAC GCCTTCACCA CCCACTTCAG CAACTTCCAC ACCGCCGACA ACGTGCGCGT CGGCCAGGAC TACACGCACG CCGGGCCGCA GTTGCTGCAG TACCTGATCG GCCAGGCGCA GATCCCCGAG TACCAGGTGC GCTGGCGCTG GCGGCCCAAC AGCATGGCCA TGTGGGACAA CCGCTCGACC CAGCACTACG CCGTCATGGA CTACCCGCCG AGCCACCGAA AGATGGAGCG TGCCGGCATC GTCGGCGACA CGCCGTTCTG A
|
Protein sequence | MNTPTSTATL AAPAIVSAAA LQRSIHVEPL TCSIGAELSH VNLGAASRDP DLVAEIRALL LRHRVLFFRD QDISRAEHVA FARHFGELED HPVAGSDPEH PGLVRIYKNP DQPADRYENA WHTDATWREK PPFGCVLRCI ECPPVGGDTM WANMVLAYER LPEHVKTQIA GLRARHSIEA SFGAAMPIDK RLALKAQFPD AEHPVVRTHP ETGEKILFVN AFTTHFSNFH TADNVRVGQD YTHAGPQLLQ YLIGQAQIPE YQVRWRWRPN SMAMWDNRST QHYAVMDYPP SHRKMERAGI VGDTPF
|
| |