| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2166 |
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| Symbol | |
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| ID | 6163498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2369829 |
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| End bp | 2370200 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664934 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001791197 |
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| Protein GI | 171058848 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.112377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCACGA CGATGAACGA CGACGGCTGG GTCGACGCCC TCGGCGCTGA AGAACTGCCC
GAAGGCGGCC GCCGCCTGCT GCGCCTGGCC GGCCGCGAGA TCGCGCTGTT CCATGTCGAC
GCCGCCTACT ACGCGCTAGA CGACAGCTGC CCGCACGCCG GCGCCTCGCT GGCCGGCGGC
CGACTGGAGG GCAAACACAT CGTCTGCCGC GCCCACGGCC TGCGCTTCGA ACTCGCCACC
GGCTGCATGG CCCGGGTGGC GGGTTTCGGC ACGCCGGTGC ACCCGGTGCG CGTGCGCGAC
GGGCGGGTCG AGATCCGGCT GCCGATCGAG CGCGGCGCCA CCATCCCCAT CCTTTCGAAG
GAAACCCCAT GA
|
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| Protein sequence | MGTTMNDDGW VDALGAEELP EGGRRLLRLA GREIALFHVD AAYYALDDSC PHAGASLAGG
RLEGKHIVCR AHGLRFELAT GCMARVAGFG TPVHPVRVRD GRVEIRLPIE RGATIPILSK
ETP
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