Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2115 |
Symbol | |
ID | 6162022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2311423 |
End bp | 2312343 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641664884 |
Product | pyruvate carboxyltransferase |
Protein accession | YP_001791147 |
Protein GI | 171058798 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.348555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCAT TGCCCTCACG CGTCACGCTG GTCGAAGTCG GCCCGCGCGA CGGTCTGCAG AACGAAAAAC AGCCGGTAGC CGCCGCCCAC AAGATCGCGC TCGTCCACGC GCTGCAGGGC GCCGGCCTTC GAGAAATCGA GGTCACCAGC TTCGTCAGCC CGAAATGGGT GCCGCAGATG GCCGACAACG CCGAGGTCAT GGCCGGCATC ACGCGCCAGC CGGGCGTGCG CTATTCGGTG CTGACGCCCA ACCTCAAGGG CTGGGAGGCG GCGGTGGCGA CGCGGCCCGA CGAGATCGTC GTCTTCGGCG CCGCCAGCGA GGCTTTCAGC CAGCGCAACA TCAACTGCTC GATCGCCGAA TCCATCGAAC GTTTTGCGCC GGTGGTGCAG GCCGCGCGTG CGGCGGGCGT CAAGGTGCGC GCGGCGATCT CGTGCGCGGT CGGTTGCCCG TACGAAGGCG ACATCGCGCC CGAACGGGTC GAGCTGGTCG CCCGGCTGAT GTCCGGCATC GGCGTGCAGC ACGTCGGCGT GGCCGACACC ATCGGCGTGG GCACGCCGCG CCGGGTGCAG GCGGCGCTCG AAGCCGCGCT GCGGCACTTC CCGATCGACG AGGTCAGCGG TCATTTCCAC GACACCTACG GCATGGCGCT GGCCAACGTC TACGCCAGCC TGGAGCTGGG CATCCACACC TTCGACACCA GCGTCAGCGG CCTGGGCGGC TGCCCCTACG CCAAGGGCGC GACCGGCAAC GTCGCGACCG AGGACGTGGT CTACCTGCTG CAGGGCCTGG GCATCGACAC CGGCATCGAT CTGGATGCGC TGATCGACGC CGGGGCGGCG ATCCGCGCGG TGCTCGGCCA GCCGAACGGC TCGCGGGTGG CGCGGGCGCT GCTGGCCAGG CGGTCGGCGC CAGCAAGCTG A
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Protein sequence | MSPLPSRVTL VEVGPRDGLQ NEKQPVAAAH KIALVHALQG AGLREIEVTS FVSPKWVPQM ADNAEVMAGI TRQPGVRYSV LTPNLKGWEA AVATRPDEIV VFGAASEAFS QRNINCSIAE SIERFAPVVQ AARAAGVKVR AAISCAVGCP YEGDIAPERV ELVARLMSGI GVQHVGVADT IGVGTPRRVQ AALEAALRHF PIDEVSGHFH DTYGMALANV YASLELGIHT FDTSVSGLGG CPYAKGATGN VATEDVVYLL QGLGIDTGID LDALIDAGAA IRAVLGQPNG SRVARALLAR RSAPAS
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