Gene Lcho_2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2090 
Symbol 
ID6162065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp2279252 
End bp2279893 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID641664859 
Productmaleylacetoacetate isomerase 
Protein accessionYP_001791122 
Protein GI171058773 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTCT ACAACTACTA CCGTTCTTCG GCCTCGTTTC GCGTGCGCAT CGCGCTGGCG 
CTCAAGGGCC TGGGCTACGA CTACCAGCCG GTCCATCTGG TGCGCAACGA GCAGCTCTCG 
GCCGACTATT CGGCCCTGTC GGCGCAGCGG CTGGTGCCGC TGCTGGTCGA CGGCGATGCC 
ACCGTCAGCC AGTCGCTCGC GATCATCGAG TATCTCGACG AAACCCATCC GCAGCCGCCG 
CTGTTGCCCG CCGACGCGCT GGGGCGCGCA CGGGTGCGCT CGCTGGCGCT CGACATCGCC 
TGCGAGATCC ACCCGCTCAA CAACCTGCGC GTGCTGCGCT ACCTCGTCAA GGACCTGGGC 
GTGAACGAGG ACGCCAAGAA CGGCTGGTAT CGGCACTGGG TCGAGGGCGG GCTCGAGGCG 
GTCGAGCGCC GCCTGGCCGC CGATGCCGCC ACCGGCACCT TCTGCCACGG CGACCAGCCC 
GGTCTGGCCG ACTGCGTGCT GGTGCCGCAG ATCTTCAACG CCCAGCGCTT CGATTGCCAG 
ATCGACCAGT TGCCGACGAT CACGCGCATC TTCCAGGCCT GCATGGCCTT GCCGGCCTTC 
CAGGCCGCCG AGCCGTCGGC GTGCCCGGAC GCGGAGACCT GA
 
Protein sequence
MQLYNYYRSS ASFRVRIALA LKGLGYDYQP VHLVRNEQLS ADYSALSAQR LVPLLVDGDA 
TVSQSLAIIE YLDETHPQPP LLPADALGRA RVRSLALDIA CEIHPLNNLR VLRYLVKDLG 
VNEDAKNGWY RHWVEGGLEA VERRLAADAA TGTFCHGDQP GLADCVLVPQ IFNAQRFDCQ 
IDQLPTITRI FQACMALPAF QAAEPSACPD AET