Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2086 |
Symbol | |
ID | 6162351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2275045 |
End bp | 2276223 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641664855 |
Product | acetyl-CoA acetyltransferase |
Protein accession | YP_001791118 |
Protein GI | 171058769 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.849145 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAA TCGTCATCGT CGCAGCCGCA CGCACTGCTG TCGGCAAGTT TGGTGGCAGC CTGGCCAAGG TTGCCGCACC CGAGCTGGGT GCCACCGTCG TGCGCGCGCT GCTCGAGCGC AGCGGGCTGG CCGGCGAGCA GATCAACGAG GTCATCCTCG GTCAGGTGCT GCAGGCCGGA GCCGGTCAGA ACCCGGCGCG CCAGACCGTG ATCAAGTCGG GCCTGCCCCA GGGCGTGCCG GCCATGACCA TCAACAAGGT CTGCGGTTCG GGCCTGAAGG CCGTGATGCT GGCCGCGCAG GCCATCCGCG ACGGCGACAG CGAGATCGTC ATCGCCGGCG GCCAGGAGAA CATGAGCGCC AGCCCGCACG TGCTGCAGGG CTCGCGCGAC GGCCAGCGCA TGGGCGACTG GAAGATGGTC GATTCGATGA TCGTCGACGG CCTGTGGGAC GTCTACAACC AGTACCACAT GGGCATCACG GCGGAAAACG TCGCCAAGAA GTACGGCGTC ACCCGCGAGA TGCAGGATGC GCTGGCACTG GCCTCGCAGC AGAAGGCCGC CGCGGCGCAG GACGCCGGCC GCTTCAAGGA CGAGATCGCT GCCGTGCTCA TCCCGCAGAA GAAGGGCGAC GCCCTGCGCT TCGAAGCCGA CGAGTTCATC AACCGCAAGA CCAGCGCCGA CGTGCTCGGC GGCCTGCGCC CGGCCTTCGA CAAGGCCGGC AGCGTCACCG CCGGCAATGC CTCGGGCCTG AACGACGGCG CCGCCGGCGT GATGGTGATG AGCGCCAAGA AGGCGGCCGC GCTGGGCCTG ACGCCGCTGG CGCGCATCGC CAGCTACGCC AGTGCCGGCC TCGATCCTGC CTACATGGGC ATGGGTCCGG TGCCCGCCGC CCGCAAGGCG CTCGAGCGCG CCGGCTGGAA GCCCGCCGAC CTCGATCTGC TCGAGATCAA CGAAGCCTTT GCCGCACAGG CCTGCGCCGT GCACCAGGAA ATGGGCTGGG ACACCAGCAA GGTGAACGTC AACGGTGGCG CCATCGCCAT CGGCCACCCG ATCGGCGCAT CCGGTTGCCG CATCCTGGTC ACGCTGCTGC ACGAAATGCA GCGCCGTGAT GCCAAGCGCG GCATCGCCTC GCTGTGCATC GGCGGCGGCA TGGGCGTGGC GCTGACGGTC GAACGCTGA
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Protein sequence | MSEIVIVAAA RTAVGKFGGS LAKVAAPELG ATVVRALLER SGLAGEQINE VILGQVLQAG AGQNPARQTV IKSGLPQGVP AMTINKVCGS GLKAVMLAAQ AIRDGDSEIV IAGGQENMSA SPHVLQGSRD GQRMGDWKMV DSMIVDGLWD VYNQYHMGIT AENVAKKYGV TREMQDALAL ASQQKAAAAQ DAGRFKDEIA AVLIPQKKGD ALRFEADEFI NRKTSADVLG GLRPAFDKAG SVTAGNASGL NDGAAGVMVM SAKKAAALGL TPLARIASYA SAGLDPAYMG MGPVPAARKA LERAGWKPAD LDLLEINEAF AAQACAVHQE MGWDTSKVNV NGGAIAIGHP IGASGCRILV TLLHEMQRRD AKRGIASLCI GGGMGVALTV ER
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