| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2067 |
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| Symbol | |
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| ID | 6162831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2246217 |
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| End bp | 2246999 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664836 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001791099 |
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| Protein GI | 171058750 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0224014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTATC GCATTGACCT GTCGGGCCGC GTGGCCCTGG TCACCGGAGC GTCCAGCGGC
CTGGGCGCGC AGTTCGCCCG CACGCTGGCC AAGGCCGGTG CCGCGGTGGT GCTGGCCGGG
CGCCGGACCG ATCGCCTGAA AGAGCTGCGT GCCGAGATCG AGTCGCACGA CGGCGACGCC
CATGTGGTCG AGCTCGACGT CACCGACATC GACAGCATCA AGTCGGCCGT GGCGCATGCC
GAGACCGAAG TCGGCACGCT CGACATCCTG ATCAACAACT CGGGCGTCAG CACCACGCAG
AAGCTGGTCG ACGTGACGGC CGACGACTAC GATTTCATCT TCGACACCAA CGTGCGCGGC
GCGTTCTTCG TGGCGCAGGA AGTCGGCAAG CGCATGGTGG CGCGCGCGGT CGGCGCGGCG
CCGGGCACCT ACATCGGCGG GCGCATCGTC AACATCGCCT CGATGGCCGG CCTGCGGGTG
CTCAGCCAGA TCGGCGTCTA CTCGATGAGC AAGGCCTCGG TGATCCACAT GACGCGGGCG
ATGGCGCTCG AGTGGGGCAA GTACGGCATC AACGTCAACG CCATCTGCCC GGGCTACATC
GACACCGAGA TCAACCACCA CCACTGGGAA ACCGACGGCG GCCAGAAACT GGTGCAGATG
CTGCCGCGCA AGCGCCTGGG CAAGCCCGAA GACCTCGACA CCAGCCTGCT GATGCTGTGC
GCCAACGAGA GCCACTTCAT CAACGGCGCG GTGATCCAGG CCGACGACGG CTTCGGCATC
TGA
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| Protein sequence | MSYRIDLSGR VALVTGASSG LGAQFARTLA KAGAAVVLAG RRTDRLKELR AEIESHDGDA
HVVELDVTDI DSIKSAVAHA ETEVGTLDIL INNSGVSTTQ KLVDVTADDY DFIFDTNVRG
AFFVAQEVGK RMVARAVGAA PGTYIGGRIV NIASMAGLRV LSQIGVYSMS KASVIHMTRA
MALEWGKYGI NVNAICPGYI DTEINHHHWE TDGGQKLVQM LPRKRLGKPE DLDTSLLMLC
ANESHFINGA VIQADDGFGI
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