Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1970 |
Symbol | |
ID | 6164108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2138159 |
End bp | 2138641 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641664739 |
Product | ribonuclease H |
Protein accession | YP_001791002 |
Protein GI | 171058653 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.501543 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCG AATCGACAGC CGGCCCGCAA GCGGTCATCG CCAAACCCGA GGTGGTGATC TACACCGACG GCGCCTGCAA GGGCAACCCG GGCCCGGGCG GCTGGGGTGC CTGGCTGGTC AGCGGCGGGC ATGAAAAGGA GCTCTGCGGC GGCGAGGCCA ACACCACCAA CAACCGCATG GAGATGATGG CGGTGATCGA GGCGCTGGCC AGCCTCAAGC GCAGCTGCCG CATCACGGTC TACACCGACA GCGCCTACGT CCAGAACGGC ATCAGCAGCT GGATTCACGG CTGGAAGCGG CGCGGCTGGA AAACCGCCGA CAACAAGCCG GTCAAGAACG TCGACCTCTG GCAGCGCCTG GATGCCTTGT CCACCTTGCA CCAGATCGAG TGGCGCTGGG TCAAGGGCCA TGCCGGCGAC CCGGGCAACG AACGCGCCGA TGCGCTCGCC AACCGCGGCG TCGAAGTCGC GCGCGCGCGC TGA
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Protein sequence | MSIESTAGPQ AVIAKPEVVI YTDGACKGNP GPGGWGAWLV SGGHEKELCG GEANTTNNRM EMMAVIEALA SLKRSCRITV YTDSAYVQNG ISSWIHGWKR RGWKTADNKP VKNVDLWQRL DALSTLHQIE WRWVKGHAGD PGNERADALA NRGVEVARAR
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