Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1952 |
Symbol | |
ID | 6162034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2115073 |
End bp | 2116356 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641664721 |
Product | phosphoribosylamine--glycine ligase |
Protein accession | YP_001790984 |
Protein GI | 171058635 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0151] Phosphoribosylamine-glycine ligase |
TIGRFAM ID | [TIGR00877] phosphoribosylamine--glycine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCA TGGTGATCGG GAGCGGTGGG CGTGAGCACG CCATCGCCTG GAAACTGGCG CAGTCGCCCA AGGTGCAGAA GGTGTTCGTG GCGCCCGGCA ACGGCGGCAC GGCGCGCCAC GGCCAGATCG TCAACATGCC GCTGACCGGC GTGAGCGAGC TGGCCGACTT CGCACAAAGC GAGAAGATCG GCCTGACCGT GGTCGGCCCC GAAGGCCCGC TGGCCGCGGG TGTGGTCGAC GAGTTCCGCC GCCGCGGCCT GCGCATCTTC GGCCCCACGC AGGCGGCCGC GCAGCTCGAG AGCTCGAAGG CCTTCTCGAA GGACTTCATG CGACGCCACG GCATCCCGAC CGCGGCCTAC GAGACCTTCA GCGATGTCGC CGCCGCGCAC GCCTATGTCG ACCGCCTCGG CGCGCCGATC GTGGTCAAGG CCGACGGCCT GGCCGCGGGC AAGGGCGTGG TCGTGGCGAC GACGCTCGAA GAGGCGCACC AGGCGGTCGA CTGGATGCTG CTCGACAACA GCCTGGGCGT GACGCACAAC GCCGGCGGCG CGCGGGTGGT GATCGAGGAG TTCCTCGACG GCGAGGAAGC GAGCTTCATC GTCATGGTCG ACGGCCGCAA CATCCTGCCG CTGGCCACCA GCCAGGACCA CAAGCGCGTC GGCGACGGCG ACACCGGCCC CAACACCGGC GGCATGGGCG CGTACTCGCC CGCCCCGGTG GTGACGCCCA ACGTGCACGC GAGGGTGATG CACGAGATCA TCCAGCCCAC CGTCGACGGC ATGGCGCGTG ACGGCATCCC GTTCACCGGC TTCCTGTACG CCGGCCTGAT GATCGATGCC CGCGGCCACG CCAAGACGCT GGAGTTCAAC ACCCGGCTCG GCGATCCGGA AACCCAGCCG ATCCTGATGC GACTGAAGAG CGACCTGGTC GACGTGTTCA TGCACGCCAC CAGCGGCACG CTCGACCAGG TGCAGCTCGA CTGGGACCGC CGGGTCGCGC TCGGCGTGGT GCTGGCTGCG GCCGGTTATC CGCAGTCGCC GCGCAAGGGC GACACGATCC GCGGCCTGCC GGCCGAAACG GAAGACTGCA TGGTCTTCCA CGCCGGCACC ACCACCGGCC CGACCGGCGA GGTGCTGACC AGCGGCGGCC GCGTGCTGTG CGTCACCGCG CTCGGCGATT CGGTGCGCAC CGCGCAGCAG CGCGCCTACC AGGGCGCGCA CGGGATCCAG TTCGACGGCA TGCACTACCG CCACGACATC GGCTACCGCG CCATCAAGCG CTGA
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Protein sequence | MKVMVIGSGG REHAIAWKLA QSPKVQKVFV APGNGGTARH GQIVNMPLTG VSELADFAQS EKIGLTVVGP EGPLAAGVVD EFRRRGLRIF GPTQAAAQLE SSKAFSKDFM RRHGIPTAAY ETFSDVAAAH AYVDRLGAPI VVKADGLAAG KGVVVATTLE EAHQAVDWML LDNSLGVTHN AGGARVVIEE FLDGEEASFI VMVDGRNILP LATSQDHKRV GDGDTGPNTG GMGAYSPAPV VTPNVHARVM HEIIQPTVDG MARDGIPFTG FLYAGLMIDA RGHAKTLEFN TRLGDPETQP ILMRLKSDLV DVFMHATSGT LDQVQLDWDR RVALGVVLAA AGYPQSPRKG DTIRGLPAET EDCMVFHAGT TTGPTGEVLT SGGRVLCVTA LGDSVRTAQQ RAYQGAHGIQ FDGMHYRHDI GYRAIKR
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