Gene Lcho_1929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1929 
Symbol 
ID6160199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2092325 
End bp2092675 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content60% 
IMG OID641664695 
Producthistone family protein DNA-binding protein 
Protein accessionYP_001790961 
Protein GI171058612 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0431821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCAT GGCCGATCGC AGTCGCGGGC TCCCGCAAGG GCATGCAGTT GTTGAAGATC 
ATCGAGAGGG GCCCCACTGT GAACAAGTCT GAATTGATTG AACACATCGC TGAGAAAGCT
GACATTTCCA AGGCTGCTGC GGCCCGCGCC CTGGAAGCGT TGATCGGCGG CGTGAAGAGC
ACGTTGAAGA AGGGCGACTC GGTTTCGCTG GTCGGTTTCG GCACGTTCGC CGTGACCAAG
CGCGCGGCAC GCAGCGGACG CAATCCGCGT ACCGGCGCGG TGATCAAGAT CAAGTCGTCG
AAAGTGCCGA AGTTCCGCCC TGGCAAGGCC TTGAAGGATT CGCTCAACTG A
 
Protein sequence
MHPWPIAVAG SRKGMQLLKI IERGPTVNKS ELIEHIAEKA DISKAAAARA LEALIGGVKS 
TLKKGDSVSL VGFGTFAVTK RAARSGRNPR TGAVIKIKSS KVPKFRPGKA LKDSLN