| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1916 |
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| Symbol | |
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| ID | 6160311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2075827 |
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| End bp | 2076942 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664680 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001790948 |
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| Protein GI | 171058599 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0579] Predicted dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0872909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAGA TCGATACGGT GGTGGTCGGC GCAGGCGTCA TCGGCCTGGC GGTGGCGCGT
GGGCTGGCCC TGGCCGGCCA CGAGGTGGTG GTGCTCGAAG CCGAGCCCGC CTTCGGCAGC
GTGACCAGTG CGCGCAACAG CGAGGTCATC CACGCCGGCA TCTACTACCC GCCCGGCTCG
CTCAAGGCCG CGCTGTGCGT GCGCGGCAAG GCGCTGCTGT ACGACTTCTG CGCGCACCAC
GGCGTGGCGC ACCGGCGCTG CGGCAAGCTG ATCGTGGCGA CACGAGCGGC GCAGGTCGCG
GCGCTGCACA AGCTGCAGGC CCAGGCGCAG GCCAACGGCG TGCACGACCT GCAATGGCTC
GACGGCGACC AGGCCCGCGC GCTCGAGCCC GCGCTGGCCT GCGAGGCCGC GCTGCTGTCG
CCCTCGACCG GCATCATCGA CAGCCACGGC CTGATGCTGG CCTTGCTCGG CGACGCGCAG
GCGGCCGGCG CCGACCTGGC CCTGTGTTCA CCGCTGCTGC AAGCCCGCCG AGATCCCGAA
GGTTTCGTGC TGGCGGTGGG CGGCGACCAG CCAATCCAGA TCCGGGCGCG GCGCCTGATC
AACGCCGCCG GGCTGGTTGC GCCGGACCTG GCGCGGCGCA TCGACGGCCT CGACACCCGC
CACGTGCCCG AGGCGTTCTA CTGCAAGGGC AACTACTTCA GCTGCGCCGG CAAGCCGGCC
TTCAGCCGCC TGATTTATCC AATCCCGGAA CAGGCCGGCC TGGGCGTGCA CGTCACGCTC
GACCTGGCCG GCCAGATGCG CTTCGGCCCC GACGTGCAGT GGTTGGCCGA CATGGATCCG
ATGGCGCCCG ATTACCACGT CGATCCACTG CGCGTGGACG GCATGGCCGA GGCGATCCGC
CGCTACTGGC CGGGACTGCC CGATGGCGCG CTGAGCCCGG CCTATTCCGG CATCCGCCCC
AAGATCAGCG GGCCCGATGA GCCGGCGGCG GATTTCCGCA TCGACGGGCC CGACGTGCAC
GGCGTGGCCG GGCTGATCAA CCTGTTCGGC ATCGAATCGC CGGGGCTGAC CGCCTGCCTG
GCCATCGCCG AACAGGTGCA GGCTCAACTC GCCTGA
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| Protein sequence | MDQIDTVVVG AGVIGLAVAR GLALAGHEVV VLEAEPAFGS VTSARNSEVI HAGIYYPPGS
LKAALCVRGK ALLYDFCAHH GVAHRRCGKL IVATRAAQVA ALHKLQAQAQ ANGVHDLQWL
DGDQARALEP ALACEAALLS PSTGIIDSHG LMLALLGDAQ AAGADLALCS PLLQARRDPE
GFVLAVGGDQ PIQIRARRLI NAAGLVAPDL ARRIDGLDTR HVPEAFYCKG NYFSCAGKPA
FSRLIYPIPE QAGLGVHVTL DLAGQMRFGP DVQWLADMDP MAPDYHVDPL RVDGMAEAIR
RYWPGLPDGA LSPAYSGIRP KISGPDEPAA DFRIDGPDVH GVAGLINLFG IESPGLTACL
AIAEQVQAQL A
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