Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1915 |
Symbol | |
ID | 6160310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2071687 |
End bp | 2075769 |
Gene Length | 4083 bp |
Protein Length | 1360 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641664679 |
Product | phosphoribosylformylglycinamidine synthase |
Protein accession | YP_001790947 |
Protein GI | 171058598 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
TIGRFAM ID | [TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0662626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGCG CCCGATCGGC GGCGCCACAG CCCTGCGGGA CTCATCGCGT GTCTTCAATT TCCAGCTCTT CGCCCCAGCA TCTGACGTCT TTCGAGGGCG GCAACGCGCT GTCCGCCTTC CGCGCCCTGG CCCTGCTGCC ACGGCTGCAG GCCGTCAGCG AACGCATCGC CGGCGTCAGC GCACGCCATG TGCACTGGGT CTGGAGCGAC AGCGCGCTCG ACCGCGCCGC CCACGACACG CTGTCGGCGC TGCTGACCTA CGGCGACCCG GCCGAAGCGG TCGATGCCGG CGCGCCCGCC AGCGTGATCG TCGTGATGCC GCGCCTGGGC ACGCTGTCGC CGTGGGCCTC CAAGGCCACC GACATCGCCC ACAACTGCGG TCTGGCGATC CACCGGGTCG AACGCGTCAC CGAATTCCGC ATCAGCCTGA AAAGCGGCCT GCTCGACGCC TTCGTCAAGA AGCCCAAGGC GCTCAGTGCG GAAGAACTGC AGGCCTGCGC GCTGCTGCTG CACGACCGCA TGACCGAGTC GGTGGCCTTC GAGCGCGAGG CCGCGCGCCA TCTGTTCGAC GCCCAGCCGG CCGAGCCGCT GGCGCATGTC GACGTGCTGG GGCAGGGCCG TGAGGCGCTG GTGGTGGCCA ACAAGGACTT CGGCCTGGCC CTGTCGGACG ACGAGATCGA CTACCTGGTC AACGCCTTCA CCGAGCTCAA GCGCAACCCG AGCGACGTCG AGCTGATGAT GTTCGCGCAG GCCAACAGCG AACACTGCCG CCACAAGATC TTCAACGCCG ACTTCACGGT CGACGGCGAG CGCCAGCCGC TGTCGATGTT CGGCATGATC CGCAACACCG AAAAGCTCGC CCCGCACGCC AGCGTGGTGG CCTACAGCGA CAACGCCTCG GTGATGCCCG GCGGCCCGAC CGAGCGCTGG CTGCCGCAGG GTTACACCAA CGCGCCGCTC TACGCCGCGC GCCAGGAAAC CGTGCACGTG CTGATGAAGG TGGAGACGCA CAACCACCCG ACCGCGATCT CGCCCTTCCC GGGCGCGTCG ACCGGCTCGG GCGGCGAGAT CCGCGACGAG GGCTCGACCG GCCGCGGCTC CAAGCCCAAG GCCGGCTTGG CCGGCTTCAG CGTCTCGAAC CTGCACCTGC CCGGCACGGA TGAGCCGTGG GAACGCGCGC CGGTCGGCAA GCCCGAGCAC ATCGCCAGCC CGCTGCAGAT CATGACCGAG GGTCCGCTGG GCGCCGCGGC CTTCAACAAC GAGTTCGGCC GGCCGAACCT GGCGGGTTAT TTCCGCGTCT TCGAGCAGGA CGTCGCCGGC CTGCGGCGCG GCTATCACAA GCCCATCATG ATCGCCGGCG GCCTGGGCAC GATCAGCGAG GACCAGACCC ACAAGCTGCC CTTCGGCGCC GGCACGCTGT TGATCCAGCT CGGCGGCCCG GGCATGCGCA TCGGCATGGG CGGCGGCGCG GCCAGCTCGA TGGCGGCGGG CACCAACACC GCCTCGCTCG ACTTCGATTC GGTGCAGCGT GGCAACCCCG AGATCCAGCG CCGCGCGCAG GAGGTCATCA ACCATTGCTG GGCGCTGGGC GCGAGCAATC CGGTGGTGGC GATCCATGAC GTCGGCGCGG GCGGCATCAG CAACGCCTTC CCCGAGCTGG TCGACGGCGC CGGCAAGGGC GCGACCTTCG ACATCCGCAA GGTGCCGCTC GAAGAAACCG GGCTGGCGCC GAAGGAAATC TGGTGCAACG AGAGCCAGGA GCGTTACGTG CTGGCGGTCA CGCCCGAGGC GCTGCCGCTG TTCGACGAGA TGTGCCGGCG TGAGCGCGCG CCCTACGCCG TGGTCGGCGT GGCCACCGAC GACCGCGAGC TGGTGCTCGA AGAAGGCCCG GGCGGCGAGC GTCCGATCGA CATGCCGATG GACGTGCTGC TCGGCAAGCC GCCCAAGATG CACCGTGACG TGCAGCGCGT GGCGCGCAGC GAGCAACCGC TGCAGCTCAC CGGCGTCAAG CTCGACGAGG TGGCTTTGAG CGTGCTGCGC CACCCGACGG TGGCCAGCAA GCGCTTCCTG ATCACGATCG GCGACCGCAC CGTCGGCGGC CTGAGCCACC GCGACCAGAT GGTCGGCCCG TGGCAGGTGC CGGTGGCCGA TTGCGCGGTG ACGCTGGCCG ACTACGCCGG TTTCCGCGGC GAGGCGATGA GCATGGGTGA GCGCACGCCG CTGGCTGCGC TCGACGCGCC GGCTTCGGGC CGCATGGCGG TGGCCGAGGC CATCACCAAC CTGCTGGCCG CGCCGATGGA GCTGTCGCGC GTCAAGCTGA GCGCCAACTG GATGGCCGCC TGCGGCGAGC CGGGCGAGGA TGCGGCGCTG TACGACACCG TCAGGACGGT CGGCATGGAA CTGTGCCCGG CGCTGGGCAT CGGCATCCCG GTGGGCAAGG ATTCGCTGTC GATGCGCACC CGCTGGAGCG ATGGCGGTCA TGCGAAGCAG GTGGTCGCGC CGGTGTCGCT GATCGTGTCG GCGTTTGTCA CGCTCGACGA CGTGCGCGGC ACGCTGACGC CGCAGCTGCG CACCGACACG CCGGCCGGCA TCGACACCAG CCTGATCCTG ATCGACCTGG GCAACGGCAA GAACCGCATG GGCGGCTCGA TGCTCGCGCA GGTGCTGGGC CAGTTCGGCA ACGAGGTGCC CGATCTGGAC GACCCGGAGC GCCTGAAGGC GCTGGTCGCG GCCATCAACC AGTTGCGTGG CGAAGGCAAG CTGCTGGCCT ATCACGACCG CAGCGACGGT GGCCTCTGGG CCTCGGCCTG CGAGATGGCG TTTGCCGGCC ATGTCGGCGT GAGCCTGAAC GTGGACATGC TGGTCACCGA AGGTGACGGC ATCACGGACA GCCGCGCCGA CACCGGCGAC TCGAAGAACT GGGCCGGCCA GGTCGGCGAG CGCCGCAACG AGCTGACGCT CAAGGCGCTG TTCAACGAGG AGCTGGGCGT TGTCATCCAG GTGGCCACCG CCGTGCGCAA CGAGGTGCTG CAGACGCTGC GCGAGCATGG CCTGTCCAAG CACAGCCACG TCATCGGCAA GACCAACGAC CGCGCCGTGG TCGAGGTCTG GCGCGATGCC AAGAACGTGT TCGCCGCGCC GCTGCAGCAG CTCCATCAGG CCTGGGACGA CGTCAGCTGG CGCATCGCCG CGCAGCGTGA CAACCCGGCC TGCGCGCACA GCGAACACGC CGCAGCCGGC GCGCCCGACG ATCGCGGCCT GCACGTGGCG CTGACCTTCG ACCCGACCGA AAACGTCGCC GCACCGTTCA TCAACCTGAC CCGCCCGAAG GTGGCGATCC TGCGCGAGCA GGGCGTCAAC TCGCATGTCG AGATGAGCTA TGCGATGGCG CAGGCCGGCT TCGACAGCCA CGACGTGCAC ATGACCGACC TGCAGACCGG CCGGGCCCGC CTCGACCAGT TCCAGGGTTT CGTGGCCTGC GGCGGCTTCA GCTACGGCGA CACGCTGGGC GCGGGCGAGG GCTGGGCGCG CTCGGTGCTG TTCAACCCGA AGCTGGCCGA GCAGTTCGCG GCCTTCTTCG GCCGCACCGA CACCTTCGCG CTGGGCGTGT GCAACGGCTG CCAGATGATG GCGGCGCTGT CGCCGATCAT CCCGGGCGCC CAGCACTGGC CCAAGTTCAC GCGCAACAAG AGCGAGCAGT TCGAGGCCCG CCTGAGCCTG GTCGAGGTGC TGGACAGCCC GTCGATCTTC TTCCGGGGCA TGGCCGGCAG CCGCCTGCCG ATCGCGGTGG CGCACGGCGA GGGTTTTGCC GATTTCTCGC AGCGCGGCGA TGCCTCGAAA GTGCAGCGCG CGATGCGCTT CGTCGACCAC GACGGCGCGC CGACCGAGGC CTATCCGCTC AACCCGAACG GCAGCCCGGA CGGCCTGACC TCGGTCACCA CCGACGACGG CCGTTTCACG GTGCTGATGC CGCACCCGGA GCGCGTTTTC CGCAACGTGC AGATGAGCTG GACGTCGGGC GACGTCGACG CGCGCAGCCC GTGGATGCGC ATGTTCGGCA ACGCACGCCG CTGGATCGGC TGA
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Protein sequence | MPGARSAAPQ PCGTHRVSSI SSSSPQHLTS FEGGNALSAF RALALLPRLQ AVSERIAGVS ARHVHWVWSD SALDRAAHDT LSALLTYGDP AEAVDAGAPA SVIVVMPRLG TLSPWASKAT DIAHNCGLAI HRVERVTEFR ISLKSGLLDA FVKKPKALSA EELQACALLL HDRMTESVAF EREAARHLFD AQPAEPLAHV DVLGQGREAL VVANKDFGLA LSDDEIDYLV NAFTELKRNP SDVELMMFAQ ANSEHCRHKI FNADFTVDGE RQPLSMFGMI RNTEKLAPHA SVVAYSDNAS VMPGGPTERW LPQGYTNAPL YAARQETVHV LMKVETHNHP TAISPFPGAS TGSGGEIRDE GSTGRGSKPK AGLAGFSVSN LHLPGTDEPW ERAPVGKPEH IASPLQIMTE GPLGAAAFNN EFGRPNLAGY FRVFEQDVAG LRRGYHKPIM IAGGLGTISE DQTHKLPFGA GTLLIQLGGP GMRIGMGGGA ASSMAAGTNT ASLDFDSVQR GNPEIQRRAQ EVINHCWALG ASNPVVAIHD VGAGGISNAF PELVDGAGKG ATFDIRKVPL EETGLAPKEI WCNESQERYV LAVTPEALPL FDEMCRRERA PYAVVGVATD DRELVLEEGP GGERPIDMPM DVLLGKPPKM HRDVQRVARS EQPLQLTGVK LDEVALSVLR HPTVASKRFL ITIGDRTVGG LSHRDQMVGP WQVPVADCAV TLADYAGFRG EAMSMGERTP LAALDAPASG RMAVAEAITN LLAAPMELSR VKLSANWMAA CGEPGEDAAL YDTVRTVGME LCPALGIGIP VGKDSLSMRT RWSDGGHAKQ VVAPVSLIVS AFVTLDDVRG TLTPQLRTDT PAGIDTSLIL IDLGNGKNRM GGSMLAQVLG QFGNEVPDLD DPERLKALVA AINQLRGEGK LLAYHDRSDG GLWASACEMA FAGHVGVSLN VDMLVTEGDG ITDSRADTGD SKNWAGQVGE RRNELTLKAL FNEELGVVIQ VATAVRNEVL QTLREHGLSK HSHVIGKTND RAVVEVWRDA KNVFAAPLQQ LHQAWDDVSW RIAAQRDNPA CAHSEHAAAG APDDRGLHVA LTFDPTENVA APFINLTRPK VAILREQGVN SHVEMSYAMA QAGFDSHDVH MTDLQTGRAR LDQFQGFVAC GGFSYGDTLG AGEGWARSVL FNPKLAEQFA AFFGRTDTFA LGVCNGCQMM AALSPIIPGA QHWPKFTRNK SEQFEARLSL VEVLDSPSIF FRGMAGSRLP IAVAHGEGFA DFSQRGDASK VQRAMRFVDH DGAPTEAYPL NPNGSPDGLT SVTTDDGRFT VLMPHPERVF RNVQMSWTSG DVDARSPWMR MFGNARRWIG
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