| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1895 |
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| Symbol | ompR |
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| ID | 6160037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2051907 |
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| End bp | 2052641 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664657 |
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| Product | osmolarity response regulator |
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| Protein accession | YP_001790927 |
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| Protein GI | 171058578 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0546897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAACC AGAACCCCCA GCGCACCGAC CGCATCGTGG TGGTTGACGA CGACGCCCGC
ATCCGCGATC TGCTGCGCCG CTATCTGACG CAGGAAGGCT TCGAGGTGCT GCTGGCCGAG
GACTCCAAGG CGCTCAACCG CATTCTGACG CGAGAGACGG TCGACCTGAT CGTGCTCGAC
CTGATGCTGC CCGGCGAGGA CGGCCTGTCG ATCTGCCGGC GCCTGCGCGC GGCCAACGAC
ATCACGCCGA TCATCATGCT GACGGCCAAG GTCGACGACG TCGACCGCAT CGTCGGCCTG
GAAGTCGGCG CCGACGACTA CCTGCCCAAG CCCTTCAACC CGCGCGAACT GCTGGCGCGC
ATCAACGCCG TGCTGCGCCG CCGGCCGGTG ATGGAAGCGC CCGGCGCGCC GTCGCGCGAG
GCTCAGAGCG TCACCTTCGG GCCGTTCGAG TTCGACCTCG CGCTGCGCCG CCTGACCCGC
GACGGCGAGG TGATCTCGCT GACCACCGGC GAGTTCTCGA TGCTCAAGGC CCTGGTGCGC
CACCCGCGCC AGCCGCTCAG CCGCGACAAG CTGGCCCAGC TGGCGCGTGG CCGCGAGTTC
GAACCCTTCG ACCGCAGCCT CGACGTGCAG GTCTCGCGGC TGCGCAAGAT GATCGAGCCC
GATCCGTCAC AGCCGCGCTA CATCCAGACC GTCTGGGGTG TCGGCTACGT CTTCGTGCCG
GACGGCGCGG CGTAA
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| Protein sequence | MTNQNPQRTD RIVVVDDDAR IRDLLRRYLT QEGFEVLLAE DSKALNRILT RETVDLIVLD
LMLPGEDGLS ICRRLRAAND ITPIIMLTAK VDDVDRIVGL EVGADDYLPK PFNPRELLAR
INAVLRRRPV MEAPGAPSRE AQSVTFGPFE FDLALRRLTR DGEVISLTTG EFSMLKALVR
HPRQPLSRDK LAQLARGREF EPFDRSLDVQ VSRLRKMIEP DPSQPRYIQT VWGVGYVFVP
DGAA
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