Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1889 |
Symbol | |
ID | 6159916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2042098 |
End bp | 2043366 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641664651 |
Product | glucose-1-phosphate adenylyltransferase |
Protein accession | YP_001790921 |
Protein GI | 171058572 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0448] ADP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.350932 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCA CCCGCATTGC CCAGGCCCGC AGCCTGACCC GCCGCTCACT CGCCCTGGTG CTGGCCGGCG GCCGCGGTTC GCGCCTGAAG GACCTGACCG ATCGGCGCGC CAAGCCGGCG GTGCACTTCG GGGGCAAGTT CCGCATCATC GACTTCGCGC TGTCGAACTG CATGAACTCG GGCATCCGCC GCATCGGCGT GATCACGCAG TACAAGTCGC ACTCGCTGCT GCGCCACCTG CAGCGCGGCT GGAGCTTCCT GCGCAACGAG ATGGGCGAGT TCGTCGACCT GCTGCCCGCG CAGCAGCGTG TCAACGAGGA AAGCTGGTAC CAGGGCACCG CCGACGCCAT CTACCAGAAC CTCGACATCA TCCGCAACTC GACGCCGCCC GACTACATCG TCGTGCTGGC CGGCGACCAC ATCTACAAGA TGGACTACTC GATCATGCTG GCCGACCACG CCGCCAGCGG TCGGGGCGTG ACGGTGGGCT GCATCGAGGT CTCGCGCGAT GAAGCCAAGG CGTTCGGCGT GATGGCGATC GACGACGAGC GCCACGTCAC CGCCTTCGTC GAGAAGCCGG CCGATCCGCC GGCCATGCCG GGCCATCCGG ACAAGTCGCT CGCCAGCATG GGCATCTACG TCTTCTCGGC CGACTACCTG TATCGCCTGC TCGAAGACGA CGCCGCCGAT CCGACCTCGG AACACGATTT CGGCAAGAAC CTGATCCCGC GTGCGGTGGC CGAGAACCAG GCGCTCGCGC ATCCGTTCTC GATGTCGGCG ATCCCCAATC CGCTGTTCGA GGGCTCCTAC TGGCGCGACG TCGGCACGGT CGACGCCTAC TGGGCCGCCA ACCTCGACCT GGCTTCGCCC ACGCCCGAGC TGAACATGTA CGACAAGGAA TGGCCGATCT GGACCTACCA GGAACAGCTG CCGCCGGCCA AGTTCGTGCA CGACTACGAC GGCCGCCGTG GCGAGGCGAT CAACTCGCTG GTGTCGGGCG GCTGCATCGT CTCGGGCTCG ACGGTGCGCA ACTCGGTGCT GTTCTCCAAC GTGCTGGTGC GCTCGTACAG CGAGATCAAC CAGACGGTGA TGCTGCCCGA CGTGCAGATC GGCCGCGGCT GCCGGCTCAG CAAGGTGGTG ATCGACCGCC GCTGCCACCT GCCCGACGGC CTGGTGATCG GCGAGGACGC CGAGCTCGAC GCCAAGCGGT TCTTCCGCAC CGAAAACGGC GTGGTGCTGG TGACACGCCG CATGCTCGCC GCGCTGTGA
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Protein sequence | MDITRIAQAR SLTRRSLALV LAGGRGSRLK DLTDRRAKPA VHFGGKFRII DFALSNCMNS GIRRIGVITQ YKSHSLLRHL QRGWSFLRNE MGEFVDLLPA QQRVNEESWY QGTADAIYQN LDIIRNSTPP DYIVVLAGDH IYKMDYSIML ADHAASGRGV TVGCIEVSRD EAKAFGVMAI DDERHVTAFV EKPADPPAMP GHPDKSLASM GIYVFSADYL YRLLEDDAAD PTSEHDFGKN LIPRAVAENQ ALAHPFSMSA IPNPLFEGSY WRDVGTVDAY WAANLDLASP TPELNMYDKE WPIWTYQEQL PPAKFVHDYD GRRGEAINSL VSGGCIVSGS TVRNSVLFSN VLVRSYSEIN QTVMLPDVQI GRGCRLSKVV IDRRCHLPDG LVIGEDAELD AKRFFRTENG VVLVTRRMLA AL
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