| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1873 |
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| Symbol | |
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| ID | 6160373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2025789 |
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| End bp | 2026649 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664635 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001790905 |
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| Protein GI | 171058556 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase
[COG2153] Predicted acyltransferase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.104835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCC GCAACAGCTT CCGTTTCCTG CACCGCCTGC GGGTGCGCTG GGCCGAGGTC
GACCTGCAGC AGGTGGTCTT CAACGGCCAC TACCTGATGT ATTTCGACAC CGCGGTGGCC
GACTACTGGC GCGCGCTGGC GCTGCCGTAT CACGAGACGA TGGCGCAGCT CGACGGCGAC
CTGTACGTGC GCAAGGCCAC GGTCGAATAC GAAGCCAGCG CCCGGTTCGA CGACCAGCTC
GAGATCGGCG TGCGCTGCGA GCGCGTCGGC AACAGCTCGA TCACCTTCAG CTGCGCGGTG
TTCCGCGCCG AGGAACTGCT CGTCGGCGGC GAACTGGTCT ACGTGTTCGT CGACCCGGTC
AGCCGCACCA GCCGGCCGGT GCCGCAGGCG CTGCGCGAGA CCCTGCTCGC CTACGAGGGC
GGCGCGCCGA TGCTCGACGT GCGGGTGGGC AGCTGGGCTG AACTGGGCGG GCGCGCCCAG
ACGATCCGCA CCGAGGTGTT CGTGCACGAG CAGCGCATCC CCGCCGAGCT GGAGTGGGAT
GCCGCCGACG CGACCTGCGT GCATGCGCTG GCCGTCAACC GCCTGGGCAT GCCGCTGGCG
ACCGGCCGGC TGCTCGAGCC GTCGCCGGGC GTGGGGCGCA TCGGCCGCAT GGCGGTGCGG
GCGTCGATGC GCGGCGGCCA TGTCGGCCGC GCCGTGCTCG ACGCGCTGCT GGCGGCGGCG
CGCGAACGCG GTTTCCACGA GGTGGTGCTG CACGCCCAGC AGTCGGCGGT CGGCTTCTAC
CTGCGGGTCG GATTCGTGCC GCGTGGCGAG GCCTTCGAGG AGGCCGGCAT CCTGCACCAG
GAGATGGTGC GCGCGCCCTG A
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| Protein sequence | MSRRNSFRFL HRLRVRWAEV DLQQVVFNGH YLMYFDTAVA DYWRALALPY HETMAQLDGD
LYVRKATVEY EASARFDDQL EIGVRCERVG NSSITFSCAV FRAEELLVGG ELVYVFVDPV
SRTSRPVPQA LRETLLAYEG GAPMLDVRVG SWAELGGRAQ TIRTEVFVHE QRIPAELEWD
AADATCVHAL AVNRLGMPLA TGRLLEPSPG VGRIGRMAVR ASMRGGHVGR AVLDALLAAA
RERGFHEVVL HAQQSAVGFY LRVGFVPRGE AFEEAGILHQ EMVRAP
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