Gene Lcho_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1856 
Symbol 
ID6163333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2006578 
End bp2007045 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content71% 
IMG OID641664618 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001790888 
Protein GI171058539 
COG category[R] General function prediction only 
COG ID[COG2153] Predicted acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACA TCGAATTTCA CTGGACCTGG GCCCGCTTCA ATGAGCTCGG CCTCGACGAC 
CTCTATGACG CGCTGGCGCT GCGCTGCCAG GTGTTCATCG TCGAGCAGGA GCCTTATCTG
GACGTCGACG GCCTCGACCG CCAGAGCTGG CACCTGATCG GCCGCGACGC GCAGGGCGTG
GTGCAGGCCT ACGCGCGGGT GGTCGACCCG GGCCTGAAGT ACGACGAGCC GTCGCTCGGC
CGGGTCGTCA CGCCCGCCGC GATGCGTGGC ACCGGCGCCG GCGACGCGCT GCTGGCCGAG
GCGATGCGGC GCTGCGACGC GGTCTGGCCC GGCCGGGCCA ACCGCATCAG CGCGCAGGCG
CACCTGCAGC GCTTCTACGG CCGCCACGGC TACGTGGCGC TGGGCGAGAT CTACATGGAA
GACAACATCC CGCACATCGA GATGCTGCGC CCGCCCCGCG ACCGCTGA
 
Protein sequence
MANIEFHWTW ARFNELGLDD LYDALALRCQ VFIVEQEPYL DVDGLDRQSW HLIGRDAQGV 
VQAYARVVDP GLKYDEPSLG RVVTPAAMRG TGAGDALLAE AMRRCDAVWP GRANRISAQA
HLQRFYGRHG YVALGEIYME DNIPHIEMLR PPRDR