| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1854 |
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| Symbol | |
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| ID | 6163376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2005049 |
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| End bp | 2006032 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664616 |
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| Product | transglutaminase domain-containing protein |
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| Protein accession | YP_001790886 |
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| Protein GI | 171058537 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAGAA TCAAACTGTC GCTCGAACTC AACTACGCGG TCGCGCACCC GGGCTGCGAC
TTCGTGTTCA ACATCCACGC CGCGCACACC CGCTGCCAGA CGGTGGTCGA AGAAAAGCTG
CTGCTCAGCC AGGCGGTGCC CTCCGAGATC CACACCGATC CGTCGAACGG CAACCGCTCG
TTGCGGCTGT CGGCCGCGCC GGGCCCGCTG AAGGTCAACT ACGACGCCAC CGTCGACCTG
ACCCACCACG TCGCCGTGCC GCAGCAGATC GACGAGGTGC CGGTGGCGCG CCTGCCGTCG
CACGTGCTGC CCTACGTCTA CCCGAGCCGC TACTGCCAGT CCGACCGGCT GGGGCGTCTG
GCGATCGCCG AGTTCGGCCA TCTCTGGAAA GGCTATTCGC GGGTGCAGGC GATCCGCGAC
TGGGTCAACC AGCGCGTGGC CTTCATGCCC AACACCACCA ACTCCAACAC CTCGGCGGCC
GACACGCTGC TCGAGCGGGT GGGTGTGTGC CGCGACTTCG CGCACCTGAT GATCGCGCTG
TGCCGCGCGG TCAACATCCC GGCGCGGTTC ACCACCGGCT TCGACTACGG CGCCGATCCG
GCGCTGGGCC CGCCGGACTT CCATGCCTAC GTCGAGTGCT ATCTCGGCGA CCGCTGGTAT
CTGTTCGATC CGTCGGGCAC CGCGATCCCG ATGGGCTTCG TGCGCCTGGC CACCGGCCGC
GACGCCGCCG ACGTGGCGTT TGCCACCATC TTCGGCTCGG TGCAGTCGCC GCCGCCGCTG
ATCCAGGTGC ATGCCATCAC CGACATGCAG CACAACTTCG AGCTGCCGCG CCATCGCTTC
GAGGCGCTGT CGACCGACAC CGGCTCGGCC AACGAACACC AGCCGCCGCA GACCGAAGCG
GCCGTGGCCG CCGCGCCGGG TCTGGCCGCC GTGCCGCCGG CGGTGGCGAC CGGCCCGGTG
CTGGTGAAGG CGGCGCCGAT CTGA
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| Protein sequence | MVRIKLSLEL NYAVAHPGCD FVFNIHAAHT RCQTVVEEKL LLSQAVPSEI HTDPSNGNRS
LRLSAAPGPL KVNYDATVDL THHVAVPQQI DEVPVARLPS HVLPYVYPSR YCQSDRLGRL
AIAEFGHLWK GYSRVQAIRD WVNQRVAFMP NTTNSNTSAA DTLLERVGVC RDFAHLMIAL
CRAVNIPARF TTGFDYGADP ALGPPDFHAY VECYLGDRWY LFDPSGTAIP MGFVRLATGR
DAADVAFATI FGSVQSPPPL IQVHAITDMQ HNFELPRHRF EALSTDTGSA NEHQPPQTEA
AVAAAPGLAA VPPAVATGPV LVKAAPI
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