| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1849 |
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| Symbol | |
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| ID | 6163371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1999650 |
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| End bp | 2001086 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664611 |
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| Product | peptidase U32 |
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| Protein accession | YP_001790881 |
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| Protein GI | 171058532 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCATCG TCGCGATTCT GGCCCTGGCC GCCGTGGACA ATCCGGGGGT GAAGATCAAA
CCACCTGAAT TGCTGCTGCC CGCCGGATCC CTGGCCAAGA TGCGCGCGGC CTACGACTTC
GGCGCCGACG CCGTCTATGC GGGCCAGCCG CGCTACTCCT TGCGCGCGCG CAACAACGAG
TTCCGGCTCG AACAGATCGG GCAAGGCATC GCCGAGGCGC ACGCGCGCGG CCGCAAGTTC
TTCGTCACCA GCAACCTGCT GCCGCACAAC GACAAGGTGC GCACCTACCT GCGCGACATC
GAGCCGGTGA TCGCGCTGCG GCCCGACGCG CTGATCATGG CCGACCCCGG CCTGATCATG
ATGGTGCGCG AGCGCATGGA AAAAGACTGG CCCGAGGTGC CGATCCACCT TTCGGTGCAG
GCCAACACGG TCAACTGGGC GGCGGTCAAG TTCTGGCAGA AGATGGGCGT GGCACGCATC
ATCCTGTCGC GCGAGCTGAG CCTGGACGAG GTCGAGGCCA TCCGCAACGA ATGCCCGGAT
ATCGAGCTGG AGGTGTTCGT GCACGGCGCG CTGTGCATCG CCTATTCGGG CCGCTGCCTG
CTGTCGGGCT ACTTCAACCG GCGGGATCCG AACCAGGGCA CCTGCACCAA CGCCTGCCGC
TGGGACTACA AGACCCACGG CGGCACCGAC GAGACCGACA GCGGCGAGGT CCAACCCACC
CCGCCGGTTC AGCTCGGCAG CGACTTCAAC TTTGCCCAGG CGCAGGCCGA GGCCGAGGGC
GCCTTTGCCG CCTGTGGTGG CAGCCCGCGC CACCCGCTGG CCGACCGGGT CTGGCTGCTC
GAAGAAAAGG AGCGCCCCGG CGAGCTGATG CCCGTGATGG AAGACGAACA CGGCACCTAC
ATCATGAACA GCAAGGACCT GCGCGCGGTC GAGCACGTCG AGCGGCTGGT GAAGATCGGC
GTCGATTCGC TCAAGATCGA AGGCCGCACC AAGAGCCAGT ACTACGTGAC GCGCACCGCG
CAGATCTATC GCCGGGCGAT CGACGATGCG GTGGCCGGGC GGCCGTTCGA CCCGAGCCTG
CTGCTGGAGC TCGAAGGCCT GTCGAATCGC GGCTACACCG CCGGCTTCCT GGAACGCCGC
CCGAGCCAGG ACTACCAGAA CTACCTCAGC GGCAGCTCGC AGGCGCACCG CAGCCAGTTC
GTCGGCGAGG TCAAAAGCGT GCGCGAAGAC GGCTGGGCCG AGGTCGAGAC CAAGAACCGC
TTTGCGGTGG GCGACACGCT GGAGGTGATC CACCCGGGCG GCAACCGGCG GGTCACGCTC
GACAAGATGA GCAGTCTCGA CGGCGAGGCC ATCCAGGTCG CGTCGGGCAG CCCGCTGCGG
GTCTGGGTGC CGCTGGGCGC GCCGGTCGAG GGGGCTCTGC TGGCGAGGTT GCTCTAG
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| Protein sequence | MRIVAILALA AVDNPGVKIK PPELLLPAGS LAKMRAAYDF GADAVYAGQP RYSLRARNNE
FRLEQIGQGI AEAHARGRKF FVTSNLLPHN DKVRTYLRDI EPVIALRPDA LIMADPGLIM
MVRERMEKDW PEVPIHLSVQ ANTVNWAAVK FWQKMGVARI ILSRELSLDE VEAIRNECPD
IELEVFVHGA LCIAYSGRCL LSGYFNRRDP NQGTCTNACR WDYKTHGGTD ETDSGEVQPT
PPVQLGSDFN FAQAQAEAEG AFAACGGSPR HPLADRVWLL EEKERPGELM PVMEDEHGTY
IMNSKDLRAV EHVERLVKIG VDSLKIEGRT KSQYYVTRTA QIYRRAIDDA VAGRPFDPSL
LLELEGLSNR GYTAGFLERR PSQDYQNYLS GSSQAHRSQF VGEVKSVRED GWAEVETKNR
FAVGDTLEVI HPGGNRRVTL DKMSSLDGEA IQVASGSPLR VWVPLGAPVE GALLARLL
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