| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1835 |
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| Symbol | |
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| ID | 6161323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1984590 |
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| End bp | 1987004 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664597 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001790867 |
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| Protein GI | 171058518 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAA ACATCGCCAC CCGGGCGGTA GACCCCCAGG CCATCGAACT GCAGGTGCTG
GGCATGACAT GCGCTTCGTG CGTGTCGCGG GTCGAGAAGA CCTTGCGTGC GGTGGCCGGC
GTGCGCCAGG CCAGCGTCAA CCTCGCCACC GAAACGGCCA CCGTCTCGGG CGACCCCGGC
CTCGACACGC AGGCGCTGGC CGCTGCGGTC CGAAAGGCCG GCTACGACGT CGGCACGCGC
AGCTTCAAGC TGCAGATCGA GGGCATGACC TGCGCGTCGT GCTCCGGCCG GGTCGAGAAG
GCCTTGCGCA AGGTGCCGGG CGTGACGTCG GCGGTGGTCA ATCTGGCCAC CGAGCAGGCC
AGCGTCGAGG GTTTGTCGGG CCTGTCGGCC GCGGTGCTGA AGGCTGCGGT CGAGCGCGCC
GGTTATGCCG TGCGCGATGC CAGCGCGCTG GCCGAGCCGG CCGCGGCATC GCGCCTGCCG
GCGTGGTGGC CGGTGGCGGC GGGTGCGGCG TTGACGCTGC CGCTGGTCGC GCCGATGCTG
CTGGCGCTGT TGGGCATCGA CGCCATGCTG CCCGGCTGGC TGCAATTGCT GCTGGCCACG
CCGGTGCAGT TCTGGCTGGG TGCGCGCTTC TACAAGGCCG GCGCCAAGGC GCTGCTGGCG
CGCAGCGGCA ACATGGACCT GCTGGTGGCG CTGGGCACGT CGGCGGCCTA CGGGCTGTCG
GTCTATCTGC TGCTGCGCCA CGCCGATCAC GGCATGCCGC ACCTGTATTT CGAGGCCTCG
GCGGCGGTCA TCACGCTGGT GCTGCTCGGC AAGTGGCTCG AAACCCGCGC CAAGCGCCAG
ACCACCGACG CGATCCGCTC GCTGCAGGCG CTGCGGCCGG TGACGGCGCG GGTGCTGCGC
GCGGGCGTCG AGATCGAGAC GCCGATCGAC CAGGTGGTGG TCGGCGACGC GGTGCGGGTG
CGCCCCGGCG AGCGCGTGCC GGTCGACGCC GAGGTGATCG ACGGCAGCAG CCAACTCGAC
GAGTCGCTGA TCACCGGCGA GAGCCTGCCG GTGGCCAAGG GCATCGGCGA GCGCGTCACC
GGCGGCTCGA TCAACGGCGA GGGCGCGCTG ACCGTGCGCA CGCTGGCGGT GGGCGCAGAG
ACCACGCTGG CACGCATCAT CCGGCTGGTC GAATCGGCGC AGGCCGGCAA GGCGCCGATC
CAGCGGCTGG TCGATCAGGT CAGCGCGGTG TTCGTGCCGG TGGTGCTGGG GATCGCGCTG
CTGACGTGGG TGGGCTGGGT GCTGGCCACG GGCGACTGGG AGGGCGCGCT GGTCAATGCG
GTGGCGGTGC TGGTGATCGC CTGCCCGTGC GCGCTGGGGC TGGCGACGCC GACCGCCATC
ATGGTCGGCA CCGGCGCGGC GGCGCGCCAC GGCATCCTGA TCAAGGACGC CCAGGCGCTC
GAACTCGCGC ACGCCGTGCA GGTGGTCGCC TTCGACAAGA CCGGCACGCT GACCGAAGGC
CGGCCGACGC TGGTCGACGC GCTGCCCGCC GGTGATCTGG GCCGCGCCGG CCTGCTGCGG
CTGGCCGCCG GCATGCAGCG CGCGAGCGAA CACCCGCTCG CCCGTGCGGT GACGCAAGCC
GCCGAGGCCG AGCGGGTCGA GCCGGCCGAC GTCAGCGACG TCAAGGCCTT GCCCGGCCGC
GGCCTGCAGG CGCGCCTGGG TGAAGACACC TTGCTGCTCG GCAGCAGCCG TCTGCTGGCC
GAACAGGGCC TGCAGCCCGG CGCACTGGCC GACGCGGCGA TCCATCTCGA AGCTCAGGGT
CGTACGCTCT CATGGTTGAT CCGCAGCGTC GCGGGACAGC CTGAACTGCT CGGCCTGCTG
GCGTTTGGCG ACGTCGTCAA ACCCGCGGCC CAGGCGGCGG TGTCGCGGCT GCGCCAGCTC
GGCGTGACCT GCGTGATGCT GACCGGCGAC AACCTCGGCA GCGCGCAGGC GGTGGGTCAG
CAGCTCGGTA TCGACGAGGT GCGCGCCCAG GTGCTGCCGG CCGACAAGGC GAAGGCGGTC
GAGGCGCTCA AGGTCGGCGG ACGGCGCGTC GCGATGGTGG GCGACGGCAT CAATGACGCC
CCGGCGTTGG CGGCCGCCGA CGTCGGCATC GCGATGGCCA CCGGCACCGA CGTGGCGATG
GAGACCGCCG GCATCACGCT GATGCGCGGC GACCCGCGGC TGGTTTCCGA TGCGATCGAC
ATCTCGCGGC GCACCTGGCG CAAGATCCGC CAGAACCTGT TCTGGGCCTT CGCGTACAAC
GTGGTCGGCA TCCCGCTGGC GGCGATGGGC CTGCTCAACC CGGTGATCGC CGGTGCGGCG
ATGGCCTTGA GCAGCGTCAG CGTGGTCGGC AACGCGCTGC TGCTGCGACG CTGGCGCCCG
GCGCGGCGCG CCTGA
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| Protein sequence | MNANIATRAV DPQAIELQVL GMTCASCVSR VEKTLRAVAG VRQASVNLAT ETATVSGDPG
LDTQALAAAV RKAGYDVGTR SFKLQIEGMT CASCSGRVEK ALRKVPGVTS AVVNLATEQA
SVEGLSGLSA AVLKAAVERA GYAVRDASAL AEPAAASRLP AWWPVAAGAA LTLPLVAPML
LALLGIDAML PGWLQLLLAT PVQFWLGARF YKAGAKALLA RSGNMDLLVA LGTSAAYGLS
VYLLLRHADH GMPHLYFEAS AAVITLVLLG KWLETRAKRQ TTDAIRSLQA LRPVTARVLR
AGVEIETPID QVVVGDAVRV RPGERVPVDA EVIDGSSQLD ESLITGESLP VAKGIGERVT
GGSINGEGAL TVRTLAVGAE TTLARIIRLV ESAQAGKAPI QRLVDQVSAV FVPVVLGIAL
LTWVGWVLAT GDWEGALVNA VAVLVIACPC ALGLATPTAI MVGTGAAARH GILIKDAQAL
ELAHAVQVVA FDKTGTLTEG RPTLVDALPA GDLGRAGLLR LAAGMQRASE HPLARAVTQA
AEAERVEPAD VSDVKALPGR GLQARLGEDT LLLGSSRLLA EQGLQPGALA DAAIHLEAQG
RTLSWLIRSV AGQPELLGLL AFGDVVKPAA QAAVSRLRQL GVTCVMLTGD NLGSAQAVGQ
QLGIDEVRAQ VLPADKAKAV EALKVGGRRV AMVGDGINDA PALAAADVGI AMATGTDVAM
ETAGITLMRG DPRLVSDAID ISRRTWRKIR QNLFWAFAYN VVGIPLAAMG LLNPVIAGAA
MALSSVSVVG NALLLRRWRP ARRA
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