| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1739 |
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| Symbol | |
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| ID | 6163276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1857325 |
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| End bp | 1858689 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641664499 |
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| Product | glutamate--putrescine ligase |
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| Protein accession | YP_001790771 |
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| Protein GI | 171058422 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0174] Glutamine synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000378796 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCACCA AAGATCACTT CACGTTCAGC GACCTGGAAA ACTGGCTCAA CGAGCGCCGC
GTCACCGAAA TCGAATGCCT CGTTCCGGAC CTCACCGGCG TGGCGCGCGG CAAGATCCTG
CCGCGCCAGA AGTTCACCGA AGACCGCGGC ATGCGCCTGC CCGAGGCGGT GGTGGCAATG
GGCGTGACCG GCGAGTTCCC CGAAGAGGGG CCCTACTACG ACGTCATCAA CCCGACCGAC
CGCGACATGC ACCTGCGCCC CGACCCGCGC ACCGTGCGCA TCGTGCCGTG GGCCACCGAC
CCGACCGCGC AGGTCATCCA CGACTGCTAC GACAAGGAAG GCCGGATGGT GCCGTTTGCG
CCCCGCTCGG TGCTGCGGCG CGTCTGCGGA CTTTTCGACG CCGAAGGCTG GAGCCCGGTG
GTGGCGCCCG AACTCGAGTT CTACCTGGTG GCGCGCAACT CCGATCCCGA CATGCCGCTG
AAACCCCCGA TCGGCCGCAG CGGCCGGGCC GAAACCTCGC GCCAGGCCTA CTCGATCGAC
GCGGTCAACG AGTTCGATCC GCTGTTCGAG GACGTCTATT CGTACTGCGA GCAGATGGAG
CTCAACGTCG ACACGCTGAT TCACGAGGTC GGCGCCGGCC AGATGGAGAT CAACTTCTTC
CACGACCACC CGCTCGGGCT GGCCGACGAG GTGTTCTTCT TCAAGCGCAC CGTGCGCGAG
GCGGCGATGC GCCACGACAT GTTCGCCACC TTCATGGCCA AGCCGATCGC CGGCGAGCCA
GGCAGCGCCA TGCACATCCA TCAAAGCGTG CTCGGCCGCG ACGGCAAGAA CCTCTTCAGC
AACCCCGACG GCACGGCCAG CCGCGAGTTC TACTGGTACA TCGGCGGGCT GCAGAAATAC
ATCCCGGCGG CGATGGCGCT GTTCGCGCCC TACGTCAACA GCTACCGCCG GCTGTCGCGC
TTCACGGCCG CACCGATCAA CATCCAGTGG GGCACCGACA ACCGCACGGT CGGCATCCGC
AGCCCGGTGG CCACGCCGGC CGCGCGCCGC ATCGAGAACC GCGTCATCGG CGCCGACGCC
AACCCCTACG TCGCGCTCGC CGCGACGCTG GCCTGCGGCT ACCTGGGCAT CAAGAACCGC
ATCGAGCCGA CCCCGGAATG CAAGGGCGAC GCCTACCTCG GCGACTTCGC GTTGCCACGC
AGCCTGGGCG AAGCGCTCGA CCTGCTGCGC AACGAAAAAG ACCTGGCCGA CGTGCTCGGC
GCCGAGTTCA TCACCGTCTA CACCGAGGTC AAGGAGATCG AGCACGCCGA GTTCATGAAG
GTGATTTCAC CGTGGGAGAG GGAGCACCTT CTCCTGCACG TCTGA
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| Protein sequence | MLTKDHFTFS DLENWLNERR VTEIECLVPD LTGVARGKIL PRQKFTEDRG MRLPEAVVAM
GVTGEFPEEG PYYDVINPTD RDMHLRPDPR TVRIVPWATD PTAQVIHDCY DKEGRMVPFA
PRSVLRRVCG LFDAEGWSPV VAPELEFYLV ARNSDPDMPL KPPIGRSGRA ETSRQAYSID
AVNEFDPLFE DVYSYCEQME LNVDTLIHEV GAGQMEINFF HDHPLGLADE VFFFKRTVRE
AAMRHDMFAT FMAKPIAGEP GSAMHIHQSV LGRDGKNLFS NPDGTASREF YWYIGGLQKY
IPAAMALFAP YVNSYRRLSR FTAAPINIQW GTDNRTVGIR SPVATPAARR IENRVIGADA
NPYVALAATL ACGYLGIKNR IEPTPECKGD AYLGDFALPR SLGEALDLLR NEKDLADVLG
AEFITVYTEV KEIEHAEFMK VISPWEREHL LLHV
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