| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1738 |
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| Symbol | |
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| ID | 6161238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1855878 |
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| End bp | 1857290 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664498 |
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| Product | putative aminotransferase |
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| Protein accession | YP_001790770 |
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| Protein GI | 171058421 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0000987202 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACACGA ACATCCCGAC CCACGCGGCG CCCCGCACCA CCGCCGACTG GCAAGCCGCC
GACGCCGCGC ACTTCCTGCA TCCGTTCACC GACTTCCAGG CGCTGGCCCG GAAGGGCTCG
CGCATCATCA CGCGCGCGCA CGACGTCTAC CTCTGGGACA GCGAGGGCCA CCAGCTGTTC
GACGCGATGA GCGGCCTGTG GTGCGTCAAC GTCGGCTACG GCCAGGAGGC CCTGGTCGAC
GCCGCCACGC AGCAGATGCG GCAACTGCCG TTCTACAACA GCTTCTTCCA GACCACCACG
CCACCGGCCG TCGAGCTGGC CGAGCTGCTG GCGCAGATCA GCCCGCCGGG TTTCCAGCAC
GTGTTCTTCG CCAACTCCGG CTCGGAGGGC AACGACACCG TCGTGCGCAT GGTGCGGCGC
TACTGGGATC TGCAGGGCCA GCCCGAGCGC CAGGTGATCA TCGGCCGCTG GAACGGCTAC
CACGGCTCGA CCATGGCCGG CGCCTCGCTC GGCGGCATGA AATACATGCA CGCGCAGGGC
GGCCTGCCGA TCCCGGGCAT CGACCACATC GACCAGCCCT ACTGGATCGA ACACGGCCGC
GGCATGGACC GCGAGGCCTT CGGCCTGAAG GCCGCGCGCT GGCTCGAAGA CAAGATCCTC
GAGATCGGCG CGGACAAGGT GGCCGCCTTC ATCGGCGAGC CAGTGCAGGG CGCGGGCGGC
GTGATCGTGC CGCCGGCGAG CTACTGGCCC GAGATCCAGC GCATCTGCGA CCGGTACGGC
ATCCTGCTGG TAAGCGACGA GGTCATCACC GGCTTCGGGC GCACCGGCAA CTGGTTCGGC
TGCCAGACCA TGGGCACGCG GCCCGACCTG ATCACCTTCG CCAAGGGCGT GACCAGCGGC
TACGTGCCGC TGGGCGGCGT GCTGGTCGGC GAGCGCGTCG CCAAGGCCCT GATCGAACAG
GGCGGCGAGT TCGAACACGG CTACACCTAC TCGGGCCACC CGGTGGCCTG CGCGGTGGCG
CTGGCCAACA TCCGGCTGAT CCGGCAGCTC GGCCTGGTCG AGCATGTGCG CGAGGACGTC
GGCCCGTATC TGGCGCAGCA GTTCGAGGCG CTGCGCGCGC ACCCGCTGAT CGGCGACACC
CAGACCTGCG GCCTGATGGG CGCGATGCTG CTGTGCAAGG ACAAGGCCGG TCCCGATGGC
GCGCCGGTGG CCTTCGACGC GTCGCTCGAA GTCGGCATGC TGTGCCGCGG CCACTGCTTC
GCCAACGGCC TGGTGATGCG CGCGGTCGGC GACCGCATGA TCATCGCGCC GCCACTGGTG
ATCACGCGCG CGCAGATCGA CGAGCTGATG GGCCTGATCC GCCGCTGCCT CGACCTGACG
CTGGCCGACC TGCGCCAACG CGGCGCGCTC TGA
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| Protein sequence | MNTNIPTHAA PRTTADWQAA DAAHFLHPFT DFQALARKGS RIITRAHDVY LWDSEGHQLF
DAMSGLWCVN VGYGQEALVD AATQQMRQLP FYNSFFQTTT PPAVELAELL AQISPPGFQH
VFFANSGSEG NDTVVRMVRR YWDLQGQPER QVIIGRWNGY HGSTMAGASL GGMKYMHAQG
GLPIPGIDHI DQPYWIEHGR GMDREAFGLK AARWLEDKIL EIGADKVAAF IGEPVQGAGG
VIVPPASYWP EIQRICDRYG ILLVSDEVIT GFGRTGNWFG CQTMGTRPDL ITFAKGVTSG
YVPLGGVLVG ERVAKALIEQ GGEFEHGYTY SGHPVACAVA LANIRLIRQL GLVEHVREDV
GPYLAQQFEA LRAHPLIGDT QTCGLMGAML LCKDKAGPDG APVAFDASLE VGMLCRGHCF
ANGLVMRAVG DRMIIAPPLV ITRAQIDELM GLIRRCLDLT LADLRQRGAL
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