| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1696 |
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| Symbol | |
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| ID | 6163204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1810717 |
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| End bp | 1812237 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664456 |
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| Product | histidine kinase |
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| Protein accession | YP_001790728 |
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| Protein GI | 171058379 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0769699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTGC CGCATCGCCT GCTCCATCGA CTGCCGGTCT TCTCGCCGGG ACGCAGCTCG
CTGCATCGTC ACCTGCTGCT GTGGCTGGTG CTGCCGCAAC TGGTGCTGTG GCTGGCCGCC
GCCGTGGTCA GCTACAACGT CGCGTTGCGT TACGCCAACC TGGCCAACGA CCGCAGCCTG
TCGTTGTCGT CGCGCGCGCT GGCGCGCCAG GTCAAGCCAG TCGGAAGCGG CCTGTACGTC
GACTTTCCGA GGGCCGCCAA GGACATCATC GAGACCGATC CGGACGACCG CGTCTATTAC
ATGGTCAGCA CGCCGCCGGG CGAGTTCATC CTCGGCAACC TGAAGCTGCC GCTGCCGCCG
GCCGACGAGC CGACACCGAT CGGCCAGCCG GTGTTCTACG ACGCCCGCAT CGACACCGCC
GAGGGCGTGA CCGCCGTGCG GGTGGCCGCC ATCACGCTCA ACTGGGGCGA GCCGGATCAG
CCGCAGCGCA TGCTGGTGCA GGTCGCCAAG AGCCGGGTCA GCCGCGAGGC TCTGGCGCGG
CAGTTGCTGT TCGACACCGC GCTGCCGCTG TCGCTGCTGA TGGCGGCGAT GTGGACGCTG
GTCTGGATCG GCATCCGCAC CGGCCTGGCG CCGCTGGCGC GGCTGCGTGA TGCGGTGAGC
GGGCGCGCAG CCAACGACCT GGCGCCGATC GAGCTCGATT CGGCCCCCGA GGAAGTGCGC
GACCTGGCCG GCGCGATGAA CGCCCTGCTG GCTGCCGTGC ACGAGAACGT CATGAACCAG
CGCCGCTTCA TCAGCGACGC CGCCCACCAG TTGCGCACGC CGCTGGCCGG GCTCAAGGGC
CAGACCGAAC TGGCGCTCAA GGAAACCACC GATCCGGCGC TGCGCACCCG GCTCGAACGG
GTGCACGAAA GCGCCACCCG CAGCGCCCAT CTGGTGACAC AACTGCTGAC GCTGGCACGC
GCCGAACCCG AATCCAGCGC CGCGCTCGGC CGGGTCTGTT TCGACCTGCG CCGGCTGGTC
CACGAACTGA CCGCCGAACT GGTGCCGCGC GCCCTCAAGG CCGGTATCGA CCTGGGCATG
GACGACAGCG CCACCGCCGA CGACGTGGCG CTGCCGGTGC TCGGCCAGCC GCTGCTGGTG
CGCGAGGCGC TGATCAACCT GATCGACAAC GCGATCCGCT ACGCCGGCCG CGGCGCGGAA
GTCACCGTGC GCTGCCTCGG CCCCGACCAC GGCGTGATCC TGGTCGAAGT CGACGACAAC
GGCCCCGGCA TAGCGCCGGC GATGGCGCAA CAGGTTTTCG AGCGCTTCTT CCGCGGCACC
ACCGAAGGCA GCGGCTGCGG ACTCGGGCTG GCGATCGTCA AGGAGATCGT CGAGCGGCAC
CAGGGCAGCG TCACGCTGTC GGCCTTGCGA CCGCACGGCG TGCGGATGCA GATCCGCCTG
CCGCTGGCCC AGCAGCCGCT CAAGAGCCCG GGCCCTGCAG GCCGGACGAC CGGCGGCGGA
TCTGGCGCAA TCGAAACGTG A
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| Protein sequence | MAVPHRLLHR LPVFSPGRSS LHRHLLLWLV LPQLVLWLAA AVVSYNVALR YANLANDRSL
SLSSRALARQ VKPVGSGLYV DFPRAAKDII ETDPDDRVYY MVSTPPGEFI LGNLKLPLPP
ADEPTPIGQP VFYDARIDTA EGVTAVRVAA ITLNWGEPDQ PQRMLVQVAK SRVSREALAR
QLLFDTALPL SLLMAAMWTL VWIGIRTGLA PLARLRDAVS GRAANDLAPI ELDSAPEEVR
DLAGAMNALL AAVHENVMNQ RRFISDAAHQ LRTPLAGLKG QTELALKETT DPALRTRLER
VHESATRSAH LVTQLLTLAR AEPESSAALG RVCFDLRRLV HELTAELVPR ALKAGIDLGM
DDSATADDVA LPVLGQPLLV REALINLIDN AIRYAGRGAE VTVRCLGPDH GVILVEVDDN
GPGIAPAMAQ QVFERFFRGT TEGSGCGLGL AIVKEIVERH QGSVTLSALR PHGVRMQIRL
PLAQQPLKSP GPAGRTTGGG SGAIET
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