Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1694 |
Symbol | |
ID | 6163202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1808250 |
End bp | 1809137 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641664454 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001790726 |
Protein GI | 171058377 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.184749 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGAT CGACCGCCAG CGTGCGGCTG GACCGCTGGT TGCCACGCAT CGTGCTGGCA CCCAGTTTCG TCCTGTCCTT CCTGTTCATC TACGGCCTGA TCGCCTGGAA CGGCTACCTC TCGGTGTCGG CCTCGCGGCT GCTGCCGAAC TACGAATTTG TCGGCCTGGA GCAGTACGCC ATCCTCTGGG AGAGCGAGCG CTGGATGGTC GCGCTCAAGA ACCTGGGCAT CTTCTCGGTG CTGTTCATCG GCTTCGCGAT GGTCGTCGGC CTGTTCCTGG CGGTGCTGCT GGACCAGAAG ATCCGCGCCG AAGGCGTGCT GCGCACGATC TACCTGTACC CGATGGCGCT GTCGTTCATC GTCACCGGCA CGTCGTGGAA ATGGATCATG AACCCGGGCC TGGGCATCGA GCACCTGATG CACCAGTGGG GCTTCGAGAA CTTCAGCTTC GACTGGCTGG TCGACCCGGA GATGGCGATC TACACCGTCG TGATCGCGGG GGTCTGGCAG AGCGCCGGCT TCGTGATGGC GCTGTTCCTG GCCGGGCTGC GCGGCATCGA CGAGTCGATC ATCAAGGCGG CCCAGATCGA CGGCGCCAGC CTGCCGCGCA TCTACCTGCG CATCATCATC CCGAGCCTGC GGCCGGTGTT CTTCAGCACG CTGATGGTGC TGGCGCACAT CGCCATCAAG AGCTTCGACC TGGTGATGGC GCTGACCGCC GGCGGCCCCG GTTTTGCCAC CGACGTGCCG GCCACCTACA TGTACACGAT GGCCTTCAAC CGCGGCCAGA TCGGCCTGGG CGCCGCGTCG GCCACGATCA TGCTGGCGAC GGTGGCGGCG ATCGTCGTGC CCTATCTCTA CAGCGAGCTG CGCTCGTCAC GCAAGTAA
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Protein sequence | MSRSTASVRL DRWLPRIVLA PSFVLSFLFI YGLIAWNGYL SVSASRLLPN YEFVGLEQYA ILWESERWMV ALKNLGIFSV LFIGFAMVVG LFLAVLLDQK IRAEGVLRTI YLYPMALSFI VTGTSWKWIM NPGLGIEHLM HQWGFENFSF DWLVDPEMAI YTVVIAGVWQ SAGFVMALFL AGLRGIDESI IKAAQIDGAS LPRIYLRIII PSLRPVFFST LMVLAHIAIK SFDLVMALTA GGPGFATDVP ATYMYTMAFN RGQIGLGAAS ATIMLATVAA IVVPYLYSEL RSSRK
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