| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1689 |
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| Symbol | |
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| ID | 6161546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1801867 |
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| End bp | 1803108 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664444 |
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| Product | O-succinylhomoserine sulfhydrylase |
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| Protein accession | YP_001790721 |
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| Protein GI | 171058372 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.79324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGAT CAACCCGAGA GCCCGGCCGC CTGCCGCGCG TCGATCTGCC GACCGATGTC
CGGCTGGAAA CCATCGCGGT GCGTGAAGGC CTGCCCGCCA CGCCCTGGGG CGAGAACTCC
GAGGCGCTGT TCCTGACCAG CAGCTTCGTG CATCCCGATG CCGCGACGGC GGCGGCGCGG
TTCGCCAATG AAGAAGAGGC GTTCGTCTAC AGTCGCTTCA CCAACCCGAC CACGATGATG
ATGGAGCGCC GGCTGGCGGC GCTCGAGGGC ACCGAGGCCT GCATCGCCAC CAGCAGCGGC
ATGTCGGCCA TCATGCTGCT GGTGATGGGG CTGCTGAAGT CGGGCGATCA CATCATCTGC
TCGCGCAGCG TGTTCGGCTC GACCATCAAG CTGCTGCAGG CCGAGTTCGG CAAGTTCGGC
GTGCAGACCA CGTTCGTCTC GCAGACCGAC GTGGCCGAGT GGCGCGCCGC GCTGCAGCCC
AACACCCGGC TGCTGTTTGC CGAGACGCCC AGCAATCCGC TGACCGAGGT CTGCGACATC
CGCGCACTGG CCGACATCGC CCACGGTGCG GGCGCGCTGC TGGCGGTCGA CAACTGCTTC
TGCTCGCCGG CGCTGCAGCA GCCCGTCAAG CTGGGCGCCG ACCTGATCAT CCATTCGGGC
ACCAAGTACC TCGACGGCCA GGGCCGCGTG GTGGCCGGTG CCGTCTGCGG CCCGGCGGCG
CTGATCGACG GCCCGTTCAT GGCCCTGATG CGCTCGGCCG GCATGTGCCT GTCGCCGTTC
AATGCCTGGG TGGTGCTGAA GGGACTCGAG ACCTTGTCGA TCCGCATGAA GGCGCAGAGC
GAGACCGCGC TGGCGCTGGC GCAGTGGCTG GAGGTGCAGC CGCAGGTGGC TCGGGTCTAT
TACCCGGGCC TGCCGTCGCA TCCTCAGCAC GAGCTGGCGA TGGCGCAGCA GGGCGGCTCA
GGCGGTGCGG TGGTCAGTTT CGTGACCCGC GGTGACGCGG CCGATGCGGC GCGTGCCAAC
GCGTTCGCGG TGATCGACGC GACCCGGATC TGCTCGATCA CGTCCAACCT GGGCGACACC
AAGACCACCG TCACGCACCC GTCGAGCACC TCGCACGGCC GCCTGACCGA GCCGCAGCGC
CTGGCCGCCG GCATCACGCA GGGCATGATC CGCGTGGCGG TCGGCCTGGA ACACATCGAT
GACCTGAAGA CCGACCTCGC GCGCGGCCTG GCCCTGATCT GA
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| Protein sequence | MSRSTREPGR LPRVDLPTDV RLETIAVREG LPATPWGENS EALFLTSSFV HPDAATAAAR
FANEEEAFVY SRFTNPTTMM MERRLAALEG TEACIATSSG MSAIMLLVMG LLKSGDHIIC
SRSVFGSTIK LLQAEFGKFG VQTTFVSQTD VAEWRAALQP NTRLLFAETP SNPLTEVCDI
RALADIAHGA GALLAVDNCF CSPALQQPVK LGADLIIHSG TKYLDGQGRV VAGAVCGPAA
LIDGPFMALM RSAGMCLSPF NAWVVLKGLE TLSIRMKAQS ETALALAQWL EVQPQVARVY
YPGLPSHPQH ELAMAQQGGS GGAVVSFVTR GDAADAARAN AFAVIDATRI CSITSNLGDT
KTTVTHPSST SHGRLTEPQR LAAGITQGMI RVAVGLEHID DLKTDLARGL ALI
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