Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1669 |
Symbol | |
ID | 6163734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1777272 |
End bp | 1779200 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641664423 |
Product | ErfK/YbiS/YcfS/YnhG family protein |
Protein accession | YP_001790701 |
Protein GI | 171058352 |
COG category | [S] Function unknown |
COG ID | [COG3034] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAGA GCCGATTCCA GCCCGTGACC GGTTCGGTCA TGCGTGCTCT TGTCGTGACC TTGATCGCCG CGACCGTGCT GGTGCTGGGC ATGAACCTGA AGGCTGCTGC GCAGCTTCCG ACGCGCGCCG ACGCGTCCGC GCACACGACC TTGCAATCGA CACCGCCAGC GTTGCGCGAG CGCATCGAGG GGGCGATCCA GATCGCCGAA CGCGGTCAGC TCGACGAGGC CGCTGCGCTG CTGCAGGAAC TGGCAAAGAC CTGGCCGGGC CGGCCGGAAC CCTGGCTGAA TCTGGCGGCG CTGGCGTCTC GTCGACAAGA TGCGCACCAG GCGCGGCTCT ATCTGGAGGC AGCCTTGCGA ACCAGTCCCG CACATGCTCA GGCCTACGAT CAACTGCAGC AGCTCAATGC CGACATGGCG CGCAAGGCCT ACGCCAAGGC CCTGGCACCT GCCGCAGCGC CCGCCGAGCC TGCCGTGCTG CCATGGACGA GCTCATTTGC AGATGAATCC GCCGGAACCG TCGAGCCTCC CGTCGCCCCC GCCTCTGACG CGCGGCAGGC ACCGGCACCG TCGCCGGCAG TGACCGCGTC GACTCGCACG GCGCCTGCCG CATCCGGCCC GATGACACCC GCCACCACAC GCCGGACCAG TGATCCCTCG AACCCGTCGG GCACCGGCAC ATCGATCGCC TGGTTGACGG CCGCCGCGCT GACGCTGCTG ATGGCCGCCG CGGCAGGCAC GGTCTGGGCA CAACGCCAGC GCAGCAGACC GGCCGGACCG GCCATCGGCG GCGACGCAGC CACCCGAACC GCGGCGACCC TCACGTCCCC CGAAGCACGC CTGATCGACA TCTACCGGCT GATCGGTGCG GCACGCCTGC CCGAAGCCCT GGCTGCTGCG GAGGCGCTGA CCCGCGACAC GCCGCGCTTC AGCCTGGCGC AGCTGGTCTA CGGCGATCTG CTGCTGGCGC AGACCGGTGC GCTGATCGAC ATGGGCCAGG GCGCGAACGC GGTCGACCCG CGCGCCGCCC ACGACGTCCA GGCCCTGCGG CAGGAAGCCT CGTTGCGCCT GCAGGCCTTG CGCGACCTTC CACCGGCCGG CGCCTGGCCG AAGCAGGTGC TGCAACTCGC GCCATCGGTG CGCCATCTGG TGGCGGTCGA CACATCCCGC TCACGCCTGT ACGTGCTCGA AAACCAGCCG GGCGGTCCGC GCCTGATCGC CCATCACTAC GTCTCGATCG GCAGCCAGGG CGTCGGCAAG CGCGAAGAAG GCGACCAGCG CACGCCGCTG GGCACCTACT ACATCACCTC CAAACTCGAC GGCAAGCAGC TCGGTGATTT CTACGGCGCC GGCGCCCTGC CCCTCAACTA TCCGAACGAT CACGATCGGC ATCTCGGGCG CACCGGCGCC AACATCTGGC TGCACGGCAC GCCGTCGGCG CAATTCGCCC GGGCGCCGCG CGCCACCAAT GGCTGCATCG TGCTGGCCAA CGACGACCTG GCCCGCTGGC TGCGCGAACT CGCCCCCAGG TCGACCCCCG TGGTGGTGGC AGACCGCCTC GAATGGGTCC ATCCGAAAGC ATTGAGCACC GACCGGCAGA CCGCGCTGGC GCTGGTCGAA TCCTGGCGGC GTGCGCGCGT GCACGAGGAC GTCGCGTCGC TGATGGCACT CTATGCGCAG CATTTCGACA ACGGCGAATC GGGCTACGAC GCCTGGCGCG CCCAGCTCGA AAGCGAGGCG CAGGCCACGC ACGGACGCGA ACGCCAGCTC GACGACATCA GCGTGCTGGC CTGGCACGAG CGCAGCGATG TGCGGGTGAT CACCTTCACC GAGGTGCTGC GCGGCAGCAC GCGCGCAATC ACGCGGCGCC AGTACTGGTC GCACGAAAGT GGACAATGGA AGATCTTTTC CGAAGGAGTC ATCGAATGA
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Protein sequence | MLQSRFQPVT GSVMRALVVT LIAATVLVLG MNLKAAAQLP TRADASAHTT LQSTPPALRE RIEGAIQIAE RGQLDEAAAL LQELAKTWPG RPEPWLNLAA LASRRQDAHQ ARLYLEAALR TSPAHAQAYD QLQQLNADMA RKAYAKALAP AAAPAEPAVL PWTSSFADES AGTVEPPVAP ASDARQAPAP SPAVTASTRT APAASGPMTP ATTRRTSDPS NPSGTGTSIA WLTAAALTLL MAAAAGTVWA QRQRSRPAGP AIGGDAATRT AATLTSPEAR LIDIYRLIGA ARLPEALAAA EALTRDTPRF SLAQLVYGDL LLAQTGALID MGQGANAVDP RAAHDVQALR QEASLRLQAL RDLPPAGAWP KQVLQLAPSV RHLVAVDTSR SRLYVLENQP GGPRLIAHHY VSIGSQGVGK REEGDQRTPL GTYYITSKLD GKQLGDFYGA GALPLNYPND HDRHLGRTGA NIWLHGTPSA QFARAPRATN GCIVLANDDL ARWLRELAPR STPVVVADRL EWVHPKALST DRQTALALVE SWRRARVHED VASLMALYAQ HFDNGESGYD AWRAQLESEA QATHGRERQL DDISVLAWHE RSDVRVITFT EVLRGSTRAI TRRQYWSHES GQWKIFSEGV IE
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