Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1666 |
Symbol | |
ID | 6162139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1775352 |
End bp | 1776200 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641664420 |
Product | UDP-2,3-diacylglucosamine hydrolase |
Protein accession | YP_001790698 |
Protein GI | 171058349 |
COG category | [S] Function unknown |
COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.888123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGACG CTGCCGCCAT CCGGGCCGAC GGCCGCATGC CAGCGGCTCT CGATGGCGCG CCGCCGGTCT GGACGCTCGA TCCACGCTGG CAGGCGGTGG ACTTCGTCTC CGACCTGCAT CTGGCCGACG ACACCCCCCG GACCACCGCC ACCTTCTGCG CCTACCTGCA GCACACGACC GCCGACGCGG TCCTGCTGCT GGGCGACATC TTCGAAGTCT GGGTCGGCGA CGACTGCCTG GATGAACCGG GCAGCTTCGA GGCGCGCTGC GCGGCCACGC TCGCGCAGGC GGCGCGACAG CGCTGCGTCG GCTTCATGGT GGGAAATCGC GACTTCCTGC TGGGCGCTGC GGCCTGCCAG GCCATCGGAC TGCGCGCCTT GCCCGACCCC ACGCTGCTGA GCGCCTGGGG CCAGCGCACG CTGATCGCCC ATGGCGACGC CTGGTGCCTG GACGACATCC CGTACCAGCA GTTTCGCCAG CAGGTTCGCT CGGCGCAGTG GCAGCAGGCT TTCCTGGCTC GCCCGCTGGC GGAGCGCCGT GCGATTGCCC GCCAGTTGCG CACCGCCAGC GAGAACCAGA AACACCGACT GGGCGCTTCG GCCTATGTCG ACCTCGACAC AACCGCGGTC GACCAGGCGC TGCACGCCGC TGGCGCAGCG GTGCTGGTGC ATGGCCACAC GCACCGACCC GCCACGCACG CGCTGGCGGA CGGCCTCACC CGCCACGTCC TGAGCGACTG GCACTGCGAG CCCGATGACG CGCCCCGGCG TGCCGAGGTG CTGCGCTGGA CGTCGAACGG ATTCACCCGC CTGCACGTCG ACGAGCGCGG CCGCACCACG CCATGCTGA
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Protein sequence | MIDAAAIRAD GRMPAALDGA PPVWTLDPRW QAVDFVSDLH LADDTPRTTA TFCAYLQHTT ADAVLLLGDI FEVWVGDDCL DEPGSFEARC AATLAQAARQ RCVGFMVGNR DFLLGAAACQ AIGLRALPDP TLLSAWGQRT LIAHGDAWCL DDIPYQQFRQ QVRSAQWQQA FLARPLAERR AIARQLRTAS ENQKHRLGAS AYVDLDTTAV DQALHAAGAA VLVHGHTHRP ATHALADGLT RHVLSDWHCE PDDAPRRAEV LRWTSNGFTR LHVDERGRTT PC
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