| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1659 |
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| Symbol | |
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| ID | 6161555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1769489 |
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| End bp | 1770226 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664413 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001790691 |
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| Protein GI | 171058342 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGACGCA TTCTGGTGGT CGAGGACGAG CCGGCGATCG CCGAGCTGAT CTCGATGAAC
CTGCGCCACG CGGGTTATGA CCCGCACACC GTCGGCAGCG CCGGCGAGGC TCACGAGGCG
GTGCGCGATG CCCTGCCGGA CCTCGTGATC CTCGACTGGA TGCTGCCGGG CGAGTCGGGC
GTGTCGCTGG CGCGGCGCTG GCGTGCCGAC GCGCGCACCC GCGAGCTGTC GATCATCATG
CTGACCGCGC GCAGCAGCGA ACAGGACATG GTGCAGGGGC TCGACGCCGG CGCCGACGAC
TACCTGTCCA AGCCCTTCTC GACCGCCGAA CTGCTGGCGC GCATCCGCGC GGTGCTGCGT
CGCAAGCTGC CGGAGGCGCT GGAGGCGGCG GTGGAGGTGG GCCCGCTCCG GCTCGACCCG
GCTGCGCACC GGGTCTTCCA TCAGCATGAC GAGGTCACGC TGGGGCCGAC CGAGTTCCGG
CTGCTGCGTT TCCTGATGAC CTATCCCGAG CGTGTGCACA GTCGCGGCCA GCTGCTGGAC
CGGGTCTGGG GCGACCATGT CTTCATCGAG GAGCGCACGG TCGACGTGCA CATCAAGCGC
CTGCGCGGCG TGCTGGCACC GTACGGTTGC GCCGAGCTGA TCGAGACGGT GCGTGGCGCC
GGCTACCGCT TGGCACGCAA GCTGCCGACG GCCGTGCCGG GCGGCGGGCC CGCGGGGGCG
GACGTGCCGA TGCGCTGA
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| Protein sequence | MGRILVVEDE PAIAELISMN LRHAGYDPHT VGSAGEAHEA VRDALPDLVI LDWMLPGESG
VSLARRWRAD ARTRELSIIM LTARSSEQDM VQGLDAGADD YLSKPFSTAE LLARIRAVLR
RKLPEALEAA VEVGPLRLDP AAHRVFHQHD EVTLGPTEFR LLRFLMTYPE RVHSRGQLLD
RVWGDHVFIE ERTVDVHIKR LRGVLAPYGC AELIETVRGA GYRLARKLPT AVPGGGPAGA
DVPMR
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