| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1642 |
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| Symbol | |
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| ID | 6161289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1745840 |
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| End bp | 1747870 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664396 |
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| Product | oligopeptidase A |
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| Protein accession | YP_001790674 |
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| Protein GI | 171058325 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.257802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCACT CCAACCCCTT GCTGAACGCG GGCGCCCTGC CCGCCTTCGA TGCGATCCGT
CCCGAACACG TCGGCCCCGC GATCGACACG CTGCTGGCGC AGGCTGAAGC CGCGCTCGAA
GCCGCCGTGA GCGAGCAGAC GCCGGCCGAA TACGAGGCGC TGTCGCGCGT GCTGTCGGTA
CCGACCGAGC GGCTGGGCCG GGCCTGGGGC GCGGTCGGCC ACCTCAAGGG CGTGATGGAC
ACGCCCGAGC TGCGCGCCGC GTTCAACGAC AAGCTGCCGG CGATCACCGA CTTCTACACC
CGCCTGGGTG CCGACGAGCG GCTCTACGCC AAGTACAAGG CGGTCGCGGC CAGCCCGGCT
GCGGCGCAGC TGAACAAGGC CCGTCAGCAG GAGCTCAAGC ACAGCCTGCG CGACTTCGTG
CTCGGTGGCG CCGAGCTGCA GGGCGAGGCC AAGACACGCC ACGCGCAGAT CCAGGAAGAG
CAGGCGCTGC TGTCGCAGAA GTTCTCCGAA CACGTGCTCG ACGCCACCGA CGGCTACGCG
CTGTTCGTCA GCACCGACGA ACTGGCCGGC GTGCCCGCCG ACGTGTTGAG TGCCACCCGC
GCCGCAGCCG AGAAAGACGG CCGCGACGGC CACAAGCTGA CGCTGCACAT GCCGGCCTAC
CTGCCGGTGA TGCAGTACGC CGACGACCGC ACCGTGCGCG AGTGCCTGTA CACCGCCTAC
GTCACGCGTG CCTGCGAAAC CGGCCCGGCC GAGCGCGACA ACAGCGCCGT GATGGCCGAC
ATCCTGCGCC TGCGCCACGA AGAGGCCGCG CTGCTGGGCT ACGCCAACTA CGCCGAGCTG
TCGCTGGTGC CCAAGATGGC GCACGACCCG AAGCAGGTCA CCGATTTCCT GCGCGACCTG
GCGCGCCGCG CGCGGCCGTT TGCCGAGCGC GATCTGGCCG AACTGCGCGA GTTCGCTGCC
CGTGAACTGG GACTGGCCGA TCTGCAATCC TGGGACAGCG CCTACGCCAG CGAGAAGCTC
AAGGAGGCGC GTTATGCCTT CAGCGACCAG GCCGTCAAGC AGTACTTCAC CGAGCCCAAG
GTGCTGGCCG GGCTGTTCCG CATCATCGAG ACGCTGTTCG AGGTGGCGAT CCGCCCCGAC
AGCGCGCCGG TGTGGCACGA GTCGGTGCGC TTCTACCGCA TCGAGCGCGC AGGCGCTCTG
GTCGGTCAGT TCTACCTCGA CCCCTACGCG CGCCCCGGCA AGCGCCCGGG CGCCTGGATG
GACGACGTGC GCGGCCGCTG GCTGCGCCCC GACGACGGCC AGCTGCAGAC GCCGGTGGCG
CACCTGGTGT GCAACTTCAC CGCGCCCGCC GACGGCAAGC CCGCGCTGCT GACGCACGAC
GAGGTGCAGA CGCTGTTCCA CGAGTTCGGC CACGGCCTGC ACCACATGCT CACGCAGGTG
GACGAGCTGG GCGTGTCGGG CATCAGCGGT GTCGAGTGGG ACGCGGTCGA GCTGCCGAGC
CAGTTCATGG AGAACTTCTG CTGGGAGTGG GAGGTGCTGC AGCAGCTGAC CGCCCACATC
GACAGCGGCG AGCCGCTGCC GCGCGAGCTG TTCGACAAGA TGACCGCCGC CAAGAACTTC
CAGAGCGGCA TGCAGACGCT GCGGCAGGTG GAGTTCTCGC TGTTCGACAT GCTGCTGCAC
GCCGAGCCCG GCGCCGCCGG TCGCATCCAG CAGGTCGTCG ACGCGGTACG CAACGAGGTG
GCGGTGATGA AGCCGCCCGC GTTCAACCGC TTCCAGCACA CCTTCTCGCA CATCTTCGCG
GGCGGCTACG CGGCCGGCTA CTACAGCTAC AAGTGGGCCG AGGTGCTGAG CGCCGACGCC
TGGGGTGCGT TCGAGGAAGA AGGCCTGTTC AACGCCGACA CCGGCCGGCG CTACCGGCAG
GAAATCCTCG AAGCCGGCAG CGCCCGCGAT GCGATCGACA ACTTCAAGGC CTTCCGCGGC
CGCGAGCCCA GCATCGACGC ACTGCTGCGC CACCAGGGCA TGGCCGCCTG A
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| Protein sequence | MNHSNPLLNA GALPAFDAIR PEHVGPAIDT LLAQAEAALE AAVSEQTPAE YEALSRVLSV
PTERLGRAWG AVGHLKGVMD TPELRAAFND KLPAITDFYT RLGADERLYA KYKAVAASPA
AAQLNKARQQ ELKHSLRDFV LGGAELQGEA KTRHAQIQEE QALLSQKFSE HVLDATDGYA
LFVSTDELAG VPADVLSATR AAAEKDGRDG HKLTLHMPAY LPVMQYADDR TVRECLYTAY
VTRACETGPA ERDNSAVMAD ILRLRHEEAA LLGYANYAEL SLVPKMAHDP KQVTDFLRDL
ARRARPFAER DLAELREFAA RELGLADLQS WDSAYASEKL KEARYAFSDQ AVKQYFTEPK
VLAGLFRIIE TLFEVAIRPD SAPVWHESVR FYRIERAGAL VGQFYLDPYA RPGKRPGAWM
DDVRGRWLRP DDGQLQTPVA HLVCNFTAPA DGKPALLTHD EVQTLFHEFG HGLHHMLTQV
DELGVSGISG VEWDAVELPS QFMENFCWEW EVLQQLTAHI DSGEPLPREL FDKMTAAKNF
QSGMQTLRQV EFSLFDMLLH AEPGAAGRIQ QVVDAVRNEV AVMKPPAFNR FQHTFSHIFA
GGYAAGYYSY KWAEVLSADA WGAFEEEGLF NADTGRRYRQ EILEAGSARD AIDNFKAFRG
REPSIDALLR HQGMAA
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