Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1639 |
Symbol | |
ID | 6161286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1741947 |
End bp | 1742357 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641664393 |
Product | hypothetical protein |
Protein accession | YP_001790671 |
Protein GI | 171058322 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase |
TIGRFAM ID | [TIGR00252] conserved hypothetical protein TIGR00252 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.106195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTGC TCAAGCGTCT GGGACTCGGT TGGGGTGCAG ATGAAAAACC CGCAGCAAGC CGCGGTCGGG CGGCAGAAGA CCGCGCCCTG ACGCACCTGC TGGCGCAGGG GCTGGCGCTG GTCGAGCGCA ATTATCGAGT GGCGCGCGGC CCGGCCCGGC GCGGCGGCGA AATCGACCTG GTGATGCGCG ACCGCGACGC CACGCTGGTG TTCGTGGAGG TGCGCAGCCG GCGCAATGCC CACCACGGCG GCGCGGCGGC CAGCGTGGGC CACGCCAAGC GCGCCAGCCT GATCTATGCC GCCCGGCACT ATCTGCTGCG CTTTCGTGCG CCGCCGGCCT GCCGATTCGA TCTGGTGGCG ATCGACGGCG ACGCGCTGGA ATGGCTGCCC GGCGCCTTCG ACGCCGGCTG A
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Protein sequence | MSVLKRLGLG WGADEKPAAS RGRAAEDRAL THLLAQGLAL VERNYRVARG PARRGGEIDL VMRDRDATLV FVEVRSRRNA HHGGAAASVG HAKRASLIYA ARHYLLRFRA PPACRFDLVA IDGDALEWLP GAFDAG
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