Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1577 |
Symbol | |
ID | 6163014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1676329 |
End bp | 1677399 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641664331 |
Product | S-adenosylmethionine--tRNA-ribosyltransferase- isomerase |
Protein accession | YP_001790609 |
Protein GI | 171058260 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.224924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACACCG CCTACACCGT CGCCGATTTC GATTTCGACC TGCCGCCCGA GCTGATCGCC CAGCACCCGG CGCCCGAGCG CAGCGGCTCG CGCCTGCTCG ACGCCAGCGC GCCCGCTCAG CCGGTCGACC GCATCTTCCA CGAGCTGCCC GGCCTGCTGA ATCCCGGCGA CCTGCTGGTC TTCAACGACA CCCAGGTGAT CCGCGCCCGC CTGTTCGGCG CCAAGGACAG CGGCGGCGCG GTCGAGGCGC TGGTCGAGCG CGTGCTACCG GCCGCGGCGG GCGGCGGGCA TGAAGTCTGG GCCCATCTGC GCGCCAGCAA GTCGCCGCGT GCCGGCCAGT CGGTGCTGTT CCGCAACGAC CAGGGCGAGC AGTTCAGCGC CGACGTGCTG GGCCGCTGCG GGCCGGAGGA TTCGCTGTTC CACCTGCGTT TCCCGTCGGA TGCGTTCGCG CTGCTCGAAC GCTACGGCCA CGTGCCGCTG CCGCCCTACA TCACGCATGC CGACGAGGCC GACGACGTGC GGCGCTACCA GACCGTGTTC GCCCGCCACC CCGGCGCGGT GGCGGCGCCG ACCGCGGCGC TGCATTTCGA CGAGGCCTTG CTGGCCGCGC TCGAAGCCCG CGGCGTGCGG CGCGCCAGCG TCACGCTGCA CGTGGGCGCC GGCACCTTCC AGCCGGTGCG GGTGGACCGG CTCGACCAGC ACCGCATGCA CAGCGAGTGG TTCGAGGTGC CGCAGGCCAC GGTCGATGCG ATCGCCGCCA CCCGTGCGGC CGGTGGCAAG GTGGTCGCGG TGGGCACCAC CACGCTGCGC GCGCTCGAAT CGGCTGCCCG CGGCGGCGTG CTGCGCGCCG GTGCGCAGGA GACCGACATC TTCATCACGC CCGGCTTCGC CTTCCAGGTG GTCGACCGGC TGGTCACCAA CTTCCACCTG CCCAAGAGCA CGCTGCTGAT GCTGGTGAGC GCCTTTGCCG GCCACGCCAC GATGCACGCG CTCTACCGGC ACGCGATTTC GCGCGGCTAC CGCTTCTTCA GCTATGGCGA CGCCATGTTG CTGACACGCA GCAGCGCCTG A
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Protein sequence | MNTAYTVADF DFDLPPELIA QHPAPERSGS RLLDASAPAQ PVDRIFHELP GLLNPGDLLV FNDTQVIRAR LFGAKDSGGA VEALVERVLP AAAGGGHEVW AHLRASKSPR AGQSVLFRND QGEQFSADVL GRCGPEDSLF HLRFPSDAFA LLERYGHVPL PPYITHADEA DDVRRYQTVF ARHPGAVAAP TAALHFDEAL LAALEARGVR RASVTLHVGA GTFQPVRVDR LDQHRMHSEW FEVPQATVDA IAATRAAGGK VVAVGTTTLR ALESAARGGV LRAGAQETDI FITPGFAFQV VDRLVTNFHL PKSTLLMLVS AFAGHATMHA LYRHAISRGY RFFSYGDAML LTRSSA
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