Gene Lcho_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1576 
Symbol 
ID6163275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1675768 
End bp1676169 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content70% 
IMG OID641664330 
Productcytochrome c-551 precursor 
Protein accessionYP_001790608 
Protein GI171058259 
COG category[C] Energy production and conversion 
COG ID[COG4654] Cytochrome c551/c552 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.233841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGT CCCTTGCGCG CACCACCCTG GCCGCCTGCA GCCTGCTCGC CGCGCTCTCG 
CTGAGCACCA CCGCCCGTGC CGCCGCCCCC TCCGACGACG CCATGCTCAA GCTGGCCAGC
ACCAGCGGCT GCATGACCTG CCACCACGTC GACCCCGGTG CCAAGGGCCC CGAAGGCCTG
CCGCCGATCG GCCCGGCCTG GCGCGACGTC GCCGCCAAAT ACAAGGGCGA CAAGACCGCC
GCCGCGAACC TGACCCAGGT GGTGCTGAAG GGCTCGAACC CCTACGACAG CCACTGGAAG
GGCAAGGCCT CGGGCCTGGC GATGCCGCCC AATGCCGTGG CGATCAAGCC GGCCGAGGTC
AAGCAGCTGG TCGGCTGGAT CCTCAACCTC CAAAGCAAGT AA
 
Protein sequence
MTSSLARTTL AACSLLAALS LSTTARAAAP SDDAMLKLAS TSGCMTCHHV DPGAKGPEGL 
PPIGPAWRDV AAKYKGDKTA AANLTQVVLK GSNPYDSHWK GKASGLAMPP NAVAIKPAEV
KQLVGWILNL QSK