Gene Lcho_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1570 
Symbol 
ID6163382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp1669651 
End bp1670346 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content69% 
IMG OID641664324 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_001790602 
Protein GI171058253 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.278935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATTC ATGTCCGTGA CGTGCTGAGT GCTGCCGAGC TGCAGCAGAC CCGCGAGCTG 
CTGTCCGACG CGCCCTGGGC CGACGGCGGC GTGACCGCGG GCGTGCAGTC GGCGCAGGTC 
AAGAACAACC AGCAGCTGCC GCAGGCGCAC CCGGTGACGC AGGCGTTGCA GCAGCTGGTG 
ATGGCGGGGC TGAACCGGCA CCCGACCTTC TTCTCGGCGG CGCTGCCCAA GAAGGTGTTC 
CCGCCGCTGT TCAACCGCTA CGGCGGCACG GCCAACGCGT TCGGCAACCA TGTCGACAAC 
GCCGTGCGTT TCATCACCAG CGGGCCGCAC ACCGGCCAGC GCGTGCGGAC CGACGTCAGC 
TGCACGCTGT TCCTGGCCGA GCCCGAAACC TACGACGGCG GCGAGCTGGT GATCGAGGAC 
ACCTACGGCA GCCAGCGCGT CAAGCTCGCT GCCGGTGACC TGGTGCTCTA CCCCGGCACC 
AGCGTGCACC GGGTCGAGCC GGTGACACGC GGCGCGCGGG TCGGCTGCTT CTTCTGGATC 
GAGAGCATGG TGCGCAGCGA CGAGCAGCGC CGCCTGCTCC ACGAGATGGA CCAGCACCTG 
ATGCACCTGC GCCGCACGGT CGGCGAAACC GATGCCGGCG TGATCGGCCT GACCGGCACG 
TATCACAACC TGCTGCGCCT GTGGGCCGAC ACCTGA
 
Protein sequence
MLIHVRDVLS AAELQQTREL LSDAPWADGG VTAGVQSAQV KNNQQLPQAH PVTQALQQLV 
MAGLNRHPTF FSAALPKKVF PPLFNRYGGT ANAFGNHVDN AVRFITSGPH TGQRVRTDVS 
CTLFLAEPET YDGGELVIED TYGSQRVKLA AGDLVLYPGT SVHRVEPVTR GARVGCFFWI 
ESMVRSDEQR RLLHEMDQHL MHLRRTVGET DAGVIGLTGT YHNLLRLWAD T