| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1567 |
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| Symbol | tgt |
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| ID | 6163379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1665771 |
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| End bp | 1666943 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664321 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_001790599 |
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| Protein GI | 171058250 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.841551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAATT TCGACCTCCT CACCACCGAG GGCCACGCCC GCCGCGGCCG CCTCACGCTC
AACCACGGCG TCGTCGAGAC GCCGATCTTC ATGCCCGTGG GCACCTACGG CACCGTCAAG
GGCGTGATGC CGCGCGACCT GGAGACCATG GGCGCGCAGA TCATCCTGGG CAACACCTTC
CACCTCTGGA TGCGCCCGGG GCAGGACGTG ATGGCGCAGT TCGGCGGCCT GCACCGCTTC
GAGAACTGGA CCCGGCCGAT CCTGACCGAC AGCGGCGGCT TCCAGGTCTG GAGCCTGGGC
GAGATGCGCA AGATCAGCGA GGAAGGCGTC AGGTTCGCCT CGCCGGTCAA CGGCGACAAG
CTGTTCCTGA CGCCCGAGGT CAGCATGCAG ATCCAGACCG TGCTCAACAG CGACATCGTC
ATGCAGTTCG ACGAATGCAC GCCGTACTGG CAAGGCGCCA AGAACGTCGG CCACATCACG
ACCGAAAAGG AAGCGCGCGT CTCGATGGAG CTGAGCCTGC GCTGGGCCGC TCGCTCCAAG
GCCGAGTTCG CGCGGCTGGG CAATCCGAAC GCGCTGTTCG GCATCGTGCA GGGCGGCATG
TTCGAGAGCC TGCGCGAGGA GTCGCTCAAC GCGCTGGTCG AGCTCGACTT CCCCGGCTAC
GCGGTCGGCG GCGTCAGCGT CGGCGAGCCC AAGGACGAGA TGCTGCGCAT CATGAATCAC
ACGCCCCACT TGCTACCCGC CGACAAGCCG CGTTACCTGA TGGGCGTGGG CACGCCCGAG
GACCTGGTCG ACGGCGTGGC CTGCGGCGTC GACATGTTCG ACTGCGTGAT GCCCACCCGC
AACGCCCGCA ACGGCCACCT GTTCACCCGC TACGGCGACC TGAAGATCCG CAACGCCCGC
CACAAGGCCG ACGAGCGCCC GCTCGACGAG ACCTGCAGCT GCCAGGCCTG CAAGGGCAGC
ACGCTGCCGG ATGGCCGTGT CACCGGTGGC TTCAGCCGCG CCTACCTGCA CCACCTGGAT
CGCTGCGGCG AGATGCTCGG GCCCATGCTG GCCAGCATCC ACAACCTGCA CTACTACCTG
AACCTGATGC GCGAGGTGCG CGAGGCGCTC GACGCGGGGC GCTTCGAGGC GTTTCGGGCG
CAGTTCAAGG CGGATCGGGC GCGCGGCGTT TGA
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| Protein sequence | MLNFDLLTTE GHARRGRLTL NHGVVETPIF MPVGTYGTVK GVMPRDLETM GAQIILGNTF
HLWMRPGQDV MAQFGGLHRF ENWTRPILTD SGGFQVWSLG EMRKISEEGV RFASPVNGDK
LFLTPEVSMQ IQTVLNSDIV MQFDECTPYW QGAKNVGHIT TEKEARVSME LSLRWAARSK
AEFARLGNPN ALFGIVQGGM FESLREESLN ALVELDFPGY AVGGVSVGEP KDEMLRIMNH
TPHLLPADKP RYLMGVGTPE DLVDGVACGV DMFDCVMPTR NARNGHLFTR YGDLKIRNAR
HKADERPLDE TCSCQACKGS TLPDGRVTGG FSRAYLHHLD RCGEMLGPML ASIHNLHYYL
NLMREVREAL DAGRFEAFRA QFKADRARGV
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