| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1552 |
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| Symbol | |
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| ID | 6163526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1646197 |
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| End bp | 1647528 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641664307 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001790585 |
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| Protein GI | 171058236 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.35552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCAG ACATTGCCAG CCTGCGCCGT CAGTTGCAGC AGCTGCAGGA ATTGCACGCC
ACCGGCGTGA TCGACGCCGA CACCTTCGAG CAGGGCAAGC ACAAGCTCGA GCGCCAGATG
GTCGACCAGG TGATGGCCGG CGGCGACGAC GCGTCCGCCG CGGCGGCCCC TGCCGTCGCC
GTGCCGGCGG TGGGTCAGGC GGCGCCGACT GCGATTGCAC CGCTGGCTGC GGCCGTCCAG
GCGGCCACGC CACGGCCGCG TCCGTCGGCG CGCCTGTGGG CACTCAGCAG CGTGTTCACG
CTGCTGGTCG CGGTGGCTGG TTATGCCGTG TACGGGACGC CCGCCCAGTT GACCGCCGAC
GGCGCCTCGA TGGCGGCGGC GGGCGGCGGC GCGGCAGCGC AGGGCGAGGG CGCCGGTCCG
GCCGGCAGTG CGGCATCCCA CGAGATCACG CCCGAGCAGA TCGCCGCACT GGCCGACCGC
CTGCGCGAGC GCCTGCAGAC CGAGCCCGAC AACGCCGAAG GCTGGGCGAT GCTGGCACGC
GCCTACAACA TGCTCGGCCG CGCCGAAGAT GCCGCGCCGG CCTACAAGCG GGCGATCGAG
CTCAACGGCC AGGACGCCGG CCTGATGTCC GACTACGCCG ACATCCTGGC CGTCAGCAAC
GACCGCCAGC TCGAAGGCGA GCCGCTCAAG CTGATCGAGC GAGCGCTCAA GATCGACCCC
AACCAGCCCA AGGCGCTGTC GCTGGCCGGC ACCGCCGCCT TCAACCGCAA GGACTACGCC
GGCGCGGTGC GCTACTGGGA GCGCATCCTG GTCAACCTGC CGCCCGATTC GCCGATGCTC
GACCAGGTGC GTGGCAGCGT CGACGAGGCC CGCAAGCTCG GCGGCCTGCC GGCGCGCTCG
GCCACCGCCG CGACCACCGC CGCCGCCGTC GCGCCGGCTG CACAGCCCGC ACCTGCCGCG
GCCCGGGCCA CCGCCGATGC GGCCACCGCG CAGGTCAGCG GCACCGTCAC GCTGTCGAAG
GACCTGGCCG GCAAGGCCGG GCCGGACGAC ACCGTCTTCA TCTTCGCCCG CGCCGCCGAA
GGCCCGCGCA TGCCGCTGGC GATCCTGCGC AAGCAGGTCA AGGACCTGCC CGTCACCTTC
AAGCTCGACG ACAGCACGGC GATGGGGCCG CAGATGAAGC TGTCCAACTT CCCGCAGGTG
GTGGTGGGCG CGCGCATCAG CAAGAGCGGC AACGCGATGC CGCAGCCGGG TGATCTGCAG
GGCATCAGCG CCCCGGTGGC GCTGGGCAGC AACGGCCTGA AGATCGAGAT CAACCAGGCC
GTCGGGCCCT GA
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| Protein sequence | MTPDIASLRR QLQQLQELHA TGVIDADTFE QGKHKLERQM VDQVMAGGDD ASAAAAPAVA
VPAVGQAAPT AIAPLAAAVQ AATPRPRPSA RLWALSSVFT LLVAVAGYAV YGTPAQLTAD
GASMAAAGGG AAAQGEGAGP AGSAASHEIT PEQIAALADR LRERLQTEPD NAEGWAMLAR
AYNMLGRAED AAPAYKRAIE LNGQDAGLMS DYADILAVSN DRQLEGEPLK LIERALKIDP
NQPKALSLAG TAAFNRKDYA GAVRYWERIL VNLPPDSPML DQVRGSVDEA RKLGGLPARS
ATAATTAAAV APAAQPAPAA ARATADAATA QVSGTVTLSK DLAGKAGPDD TVFIFARAAE
GPRMPLAILR KQVKDLPVTF KLDDSTAMGP QMKLSNFPQV VVGARISKSG NAMPQPGDLQ
GISAPVALGS NGLKIEINQA VGP
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