| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1550 |
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| Symbol | |
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| ID | 6163524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1645090 |
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| End bp | 1645620 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664305 |
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| Product | periplasmic protein thiol--disulphide oxidoreductase DsbE |
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| Protein accession | YP_001790583 |
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| Protein GI | 171058234 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.277857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGTC TGAAGTTCCT GGTGCCGCTG GCGCTGTTCC TGGTGCTGGC GGGGTTCCTG
CTGGTCGGCC TGAACCGCGA CCCGCGTGAA GTGCCGTCGC CGCTGATCGG CAAGCCGGCG
CCCGAGTTCG CGCTGCCGCG TCTCGACGAT GGCGCCCAGA CCATCCAGCG CGCCGACCTG
CTCGGCCAGG TCTGGATGCT CAACGTCTGG GCCTCGTGGT GCGTGGCCTG CCGCCAGGAG
CACCCGCTGC TGGTCGAGTA CGCCAAGCAG AAGCGCCTGC CGATCTACGG CCTGAACTAC
AAGGACGAAC GCGCCGACGG CCAGCAGTGG CTGGCGCAGT TCGGCAACCC CTACACCGCG
TCGCTGTACG ACCGGGCCGG CCGGGTCGGC ATCGATTTCG GCGTCTACGG CGTGCCCGAG
ACCTTCATCA TCGACCGCGA GGGCGTGGTG CGCATGAAGC ACATCGGCCC GCTGACACCC
GAGGTGATCC GCGAGCGCAT CGAACCCCTG CTGAGGCAAC TGAATGCATA A
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| Protein sequence | MKSLKFLVPL ALFLVLAGFL LVGLNRDPRE VPSPLIGKPA PEFALPRLDD GAQTIQRADL
LGQVWMLNVW ASWCVACRQE HPLLVEYAKQ KRLPIYGLNY KDERADGQQW LAQFGNPYTA
SLYDRAGRVG IDFGVYGVPE TFIIDREGVV RMKHIGPLTP EVIRERIEPL LRQLNA
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