| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1502 |
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| Symbol | |
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| ID | 6162437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1587208 |
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| End bp | 1587684 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641664257 |
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| Product | NADH dehydrogenase subunit B |
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| Protein accession | YP_001790535 |
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| Protein GI | 171058186 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0088151 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCATTG AAGGCGTTCT CAAGGAAGGT TTCGTCACGA CCAGTGTCGA TACCTTGATC
AACTGGTCCA AGACCGGCTC GCTCTGGCCG ATGACCTTCG GTCTGGCGTG CTGTGCGGTC
GAGATGATGC ATGCGGGCGC ATCACGCTAC GACATCGATC GTTTCGGCAT GCTGTTCCGC
CCCAGTCCGC GGCAGAGCGA TCTGATGATC GTGGCCGGCA CGTTATGCAA CAAGATGGCG
CCGGCGTTGC GCAAGGTCTA TGACCAGATG GCCGAGCCGC GCTGGGTGCT GAGCATGGGC
TCGTGTGCCA ATGGCGGTGG TTATTACCAC TACAGCTATT CGGTCGTGCG GGGTTGCGAC
CGCGTGGTGC CGGTCGACGT CTACGTGCCG GGCTGTCCGC CCACGGCCGA GGCGCTGCTC
TACGGCATCC TGCAGTTGCA GGCCAAGATC CGCCGCGAAA ACACCATCGC GCGCTGA
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| Protein sequence | MGIEGVLKEG FVTTSVDTLI NWSKTGSLWP MTFGLACCAV EMMHAGASRY DIDRFGMLFR
PSPRQSDLMI VAGTLCNKMA PALRKVYDQM AEPRWVLSMG SCANGGGYYH YSYSVVRGCD
RVVPVDVYVP GCPPTAEALL YGILQLQAKI RRENTIAR
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