| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1469 |
|---|
| Symbol | |
|---|
| ID | 6161544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 1552783 |
|---|
| End bp | 1553217 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641664223 |
|---|
| Product | putative nitric-oxide reductase subunit C |
|---|
| Protein accession | YP_001790502 |
|---|
| Protein GI | 171058153 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.0490072 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA GTCAGAGCGG GTTCACCAAA CAGATGGCCC GCAACATGTT CTACGGTGGC
AGCGTGTTCT TCGCACTGCT GTTCGCCGTC ATCGTCTTTC ACACCGAGCG GCAGATCCCG
AAACGCTCCA ACGCCCAGGC CATCACGCCG GCGGTGGTGG CGGGCAAGAA GATCTGGGAG
ACGCGCAACT GCATCGGCTG CCACACGCTG CTGGGCGAAG GCGCGTACTT CGCGCCCGAG
CTGGGCAACG TCTACCAGCG CCGCGGCCCC GAGTTCATCA AGGCCTGGAT GGCCGCGCAG
CCCACGCACG TCGAAGGCCG CCGGCAGATG CCGCAGTTCA ACCTCGACGC CAAGCAGCTC
GACGACCTGG TCGAGTTCCT GAAGTGGACC GGCGAGATCA ACACCGAAAA GTGGCCGCCC
AACATCGAAG GTTGA
|
|---|
| Protein sequence | MSQSQSGFTK QMARNMFYGG SVFFALLFAV IVFHTERQIP KRSNAQAITP AVVAGKKIWE
TRNCIGCHTL LGEGAYFAPE LGNVYQRRGP EFIKAWMAAQ PTHVEGRRQM PQFNLDAKQL
DDLVEFLKWT GEINTEKWPP NIEG
|
|---|
| |