| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1467 |
|---|
| Symbol | |
|---|
| ID | 6161542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 1550454 |
|---|
| End bp | 1551287 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641664221 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_001790500 |
|---|
| Protein GI | 171058151 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0714] MoxR-like ATPases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.232616 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCACA GCGAACTGCT GAAGATGACG ATGGGCGCCC CCTTCTACGC CGAGCAGGCG
GGCGAGGTGG CGCTGTTCGA GCACGCCTTC AGGCAGCGCC TGCCGCTGCT GATCAAGGGC
CCGACGGGTT GCGGCAAGAC CCGCTTCGTC GAGCACATGG CCGCGCGACT GGGCCGCCCG
CTCATCACCG TGAGCTGCCA CGACGACCTG AGCGCGGCCG ACCTGGTCGG CCGCCACCTG
ATCGGCGCGG GCAACACGGT GTGGGCGGAC GGCCCGCTGA CCCGCGCGGT GCGCAGCGGA
GCGATCTGCT ACCTCGACGA GGTGGTCGAG GCCCGCAAGG ACACCACCGT GGTGCTGCAC
CCGCTGGCCG ACGACCGCCG CGTGCTGCCG ATCGAACGCA CCGGCGAGCA GTTGGTGGCG
CCGCCCGAAT TCATGCTGGT GATCTCGTAC AACCCGGGTT ACCAGAACCT GCTCAAGAGC
CTGAAACCCA GCACGCGCCA GCGTTTCGTG GCGCTGACCT TCGGCTACCC GAACGCCGCG
GTGGAGCAGT CCATCGTGAT GACCGAAGCC GGCATCGACA CCGCGCTGGC CGCCCGCCTG
GTGCAGCTGG CGCAGGCCCT GCGGCGCCTG ACCGACCATG ACCTCGAAGA GACCGTCAGC
ACCCGCCTGC TGGTGATGGC GGCCCGCCTG GTCGCCGCCG GCCTGCCGCT GCGCGACGCC
TGCCGCGCGG CCATCGTCGA CGCGCTGACC GACGACGCCG AGACCGCCGC GGCGCTGGCC
GACGTGGTCG ACGCCGTGCT CGGCGACATC GCCAGGCACG CGGCGGCGCG CTGA
|
|---|
| Protein sequence | MDHSELLKMT MGAPFYAEQA GEVALFEHAF RQRLPLLIKG PTGCGKTRFV EHMAARLGRP
LITVSCHDDL SAADLVGRHL IGAGNTVWAD GPLTRAVRSG AICYLDEVVE ARKDTTVVLH
PLADDRRVLP IERTGEQLVA PPEFMLVISY NPGYQNLLKS LKPSTRQRFV ALTFGYPNAA
VEQSIVMTEA GIDTALAARL VQLAQALRRL TDHDLEETVS TRLLVMAARL VAAGLPLRDA
CRAAIVDALT DDAETAAALA DVVDAVLGDI ARHAAAR
|
|---|
| |