Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1457 |
Symbol | |
ID | 6162851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1536756 |
End bp | 1537433 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641664211 |
Product | curli production assembly/transport component CsgG |
Protein accession | YP_001790490 |
Protein GI | 171058141 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCCA TCCGTTCCCT CACCGCGCTG GCCGCTGCCG CCGTGCTGGC CGCCCTGTCC GGTTGCGCCA CCGAGAGCTC GCAGACCCTG GCCGTGCAGC AGGTCGAAAG CGCCGCGCGC CCCTACACCG GTGTGCGCAC GCCGGTGTCG ATCGGCAAGT TCGACAACCG CTCCAGCTAC ATGCGCGGCA TCTTCTCCGA CGGCGTCGAC CGCCTCGGCA GCCAGGCCAA GACCATCCTG ATCACGCACC TGCAGCAGAC CAACCGCTTC AACGTGCTGG ACCGCGAGAA CATGCAGGAA ACCAAGCAGG AGGCCGGCCT CAAGGGCACC GCGCAGACGC TCAAGGGTGC CGACTACGTG GTCACCGGCG ACGTCACCGA ATTCGGCCGC AAGGAGGTCG GCGACCACCA GCTGTTCGGC ATCCTCGGCC GCGGCAAGCA GCAGATCGCC TACGCCAAGG TCAACCTCAA CATCGTCAAG ACCAGCACCG CCGAGGTGGT GTATTCGAGC CAGGGCGCGG CCGAATACAG CCTGTCCAAC CGCGAGGTGA TCGGCTTCGG CGGCACCGCC AGCTACGACT CCACGCTCAA CGGCAAGGTG CTCGACCTGG CCATCCGCGA CGCCGTCAAC AAGCTCTCGG CGGCGGTCGA TTCGGGTGCA TGGAAACCGG CCCAATGA
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Protein sequence | MKSIRSLTAL AAAAVLAALS GCATESSQTL AVQQVESAAR PYTGVRTPVS IGKFDNRSSY MRGIFSDGVD RLGSQAKTIL ITHLQQTNRF NVLDRENMQE TKQEAGLKGT AQTLKGADYV VTGDVTEFGR KEVGDHQLFG ILGRGKQQIA YAKVNLNIVK TSTAEVVYSS QGAAEYSLSN REVIGFGGTA SYDSTLNGKV LDLAIRDAVN KLSAAVDSGA WKPAQ
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