| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1203 |
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| Symbol | |
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| ID | 6161153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1289947 |
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| End bp | 1290744 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663957 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001790237 |
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| Protein GI | 171057888 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATCG CCATCGTTAC TGGTGCCGCC GACGGCATCG GCTGGGCCAC CGCACAACGG
TTTGCAGCCG GCGGTGCCCG CGTGGTGCTG GCTGACCTGC GTGGTGAGTC CGCCCGCGAG
CGCGCTGCCG AGCTGGGCGC CGCCCACATC GGGCTGGCTT GCGACGTGAC GTCCGAAGCA
TCGGTCATCT CGCTGGTCGA GCAGGTGCTG TCGCAATGCG GGCGCATCGA CGTGCTGGTC
AACAACGCCG GCATCGGCGA CCAGGGCGGC GCCACGGTCG ACCAGAGGCT CGATGCCTTC
GACCGCGTGC TCGGCGTGCA CCTGCGCGGC ACCTTCCTGA TGAGCCGCGA AGTGGCCCGC
GTGATGCTGG CGCAGGCGCC GCTGGAGGGC CCGCACGGCT GCCGCGGCGC GATCGTCAAC
ATCGCCTCGA TCGTCGCATC GGCCGGCATT CCGGGCCGCA ACGCCTACGG GGCGGCCAAG
GCCGGCATCG TCGGCATGAC GAAGGCGATG GCGGTCGAGT GGGGCCTGGC GGGTGTGCGC
GTCAACGCGG TCGCGCCGGG TTATGTGCGC ACCGCGCTGG TCGAGAAGTT GCAGGCCGAG
GGCCTGCTCA ACACCGACGC CATCCACGCC CGCACGCCGA TGGGCCGCAT GGGCGCGCCG
GCCGAGATTG CCGAGGCGAT CGCCTTCCTG GCCTCGCCGC AGGCCAGCTA CATCACCGGC
TCGGTGCTGC AGGTCGACGG CGGCTGGATC GCCCATGGCG GCGCGATTCC GTCGGTGCCG
CCGGTGGTGG CGTCCTGA
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| Protein sequence | MTIAIVTGAA DGIGWATAQR FAAGGARVVL ADLRGESARE RAAELGAAHI GLACDVTSEA
SVISLVEQVL SQCGRIDVLV NNAGIGDQGG ATVDQRLDAF DRVLGVHLRG TFLMSREVAR
VMLAQAPLEG PHGCRGAIVN IASIVASAGI PGRNAYGAAK AGIVGMTKAM AVEWGLAGVR
VNAVAPGYVR TALVEKLQAE GLLNTDAIHA RTPMGRMGAP AEIAEAIAFL ASPQASYITG
SVLQVDGGWI AHGGAIPSVP PVVAS
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