| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1197 |
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| Symbol | |
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| ID | 6160964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1283214 |
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| End bp | 1284728 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663951 |
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| Product | 3-hydroxybutyryl-CoA dehydrogenase |
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| Protein accession | YP_001790231 |
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| Protein GI | 171057882 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTGA CACAACCCTG CACGGTGCTT GTCATTGGCG CCGGCATCAT GGGCGCGGGC
ATCGCCCAGA TCGCCGCCCA GGCCGGCCAT CCGGTGCGCT TGTTCGACGC CCGCGAAGGT
GCGGCCAGCG AGGCCAAGGC CAAGCTCTCG GCCAGCCTGG CGGCGCTGGT CGCCAAGGGC
AAGCTGCAGG CCGACGCCGT GGCCGCGGCG CTCGATCGCA TCGAGCCGAT CGCCGAGTTG
ACGCAAGCCG CCGATGCCGG CCTCGTGGTC GAGGCGATCG TCGAAAAACT CGACGCCAAG
CAGGCCTTGT TGCGGCAGGT CGAGGCGCTG GTGGGCGCCC GCTGCATCCT GGCGTCGAAC
ACCTCGTCGA TCTCGATCAC CGCGATGGCG CGCGGCCTGC AGCGCCCCGA GCGGCTGGTC
GGCATGCACT TCTTCAACCC GGTGGCGGTG ATGAAGCTGG TCGAGGTGGT CAGCGGCCTG
CACACCGCGC CGGCGGTGGC CGAGGCGGTC TTCCAGCTCG CCGCGGCCTG GGGCAAGACG
CCGGTGCATG CACGCTCGAC GCCGGGTTTC ATCGTCAACC GCATTGCCCG GCCGTATTAC
GCCGAGGCGC TGGCCTTGCT GCACGAACGG GCGCTGACGC CTGCGGTGCT CGATGCCTGC
CTGCGCGCGG TCGGTTTCCG CATGGGGCCG TGCGAGCTGA TCGACCTGAT CGGCCACGAC
ACCAATCTCG CGGTCACCGA ATCGGTCTAT CAGGCCAACT TCGGCGACAA GCGCTACATG
CCATCGCTGC TGCAGCGGGA GATGGTCGAC GGCGGGCTAT ACGGCCGCAA GTCGGGCCGC
GGTTTCTACG ATTACAGCGG CGGCGCAGCC TCGGCACCAG CCGCCGATGC CCCCACACCC
GATCTGGTGC CCGCCCGAAA GCTCGTGCTG CATGGCGCCG GCTGCGTGGC CGAACAATGG
TCGCGGGCGC TGACACAAGC CGGTCTGGCC TTCGATCGCA GCACCACCAG CAGCTGGATT
GGCCTCGAGA TCGACGGCGC GCAACTGCGC CTCACCGATG GCCGCCCGGC CACGCAGTTG
AGCGCGCAGA CCGGCGTGCG CGACGTGGCG GTGTTCGACC TGTTCGTCGC CGGCTCGGCG
CCCGCTGCGG CGCTGGCCTT CAGCGTCAGC GCCGGCGCGA CACCCGTCTG GGCCGAGCAG
GCCGCCGCCT GGCTGCGGCT GGCGCAGTTC GCGCCGCAGC GCATCGCCGA CGCGCCGGGC
CTGGTGGTCG CGCGCACGCT GGCGATGTTG ATCAACGAAG CCGCCGATGC GGTGCAGCAG
GGCGTCTGCA CGGCCGAGGG CGCCGACACC GCGATGAAGC TCGGCGTCAA CTACCCCGCG
GGCCCGTTCG AGTGGCTGGC CGGCTGGAGC GCCGGCGCGG TGGTGCAGTT GATCGAGCAG
CTCGATGCGA ACTACCGAGG CGAGCGTTAC CGCGTCAATG CAGCGCTGCG CCAGCAAGCC
TGGAGCCACC CATGA
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| Protein sequence | MNVTQPCTVL VIGAGIMGAG IAQIAAQAGH PVRLFDAREG AASEAKAKLS ASLAALVAKG
KLQADAVAAA LDRIEPIAEL TQAADAGLVV EAIVEKLDAK QALLRQVEAL VGARCILASN
TSSISITAMA RGLQRPERLV GMHFFNPVAV MKLVEVVSGL HTAPAVAEAV FQLAAAWGKT
PVHARSTPGF IVNRIARPYY AEALALLHER ALTPAVLDAC LRAVGFRMGP CELIDLIGHD
TNLAVTESVY QANFGDKRYM PSLLQREMVD GGLYGRKSGR GFYDYSGGAA SAPAADAPTP
DLVPARKLVL HGAGCVAEQW SRALTQAGLA FDRSTTSSWI GLEIDGAQLR LTDGRPATQL
SAQTGVRDVA VFDLFVAGSA PAAALAFSVS AGATPVWAEQ AAAWLRLAQF APQRIADAPG
LVVARTLAML INEAADAVQQ GVCTAEGADT AMKLGVNYPA GPFEWLAGWS AGAVVQLIEQ
LDANYRGERY RVNAALRQQA WSHP
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