Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1191 |
Symbol | |
ID | 6162971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1276622 |
End bp | 1277782 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641663945 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001790225 |
Protein GI | 171057876 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATCG ACACCGAATC ATTCGACCTG CTGCTCGCCA GCGTGCAGCG CTTCATCCGC GAACGCCTCG TGCCGGCCGA AAACGCCGTC GAGGAGCACG ACGAGGTGCC GGCCGACATC ATCGAGGACA TGAAGGAGAT GGGCCTGTTC GGCCTGACGG TGCCCGAGGA ATACGGCGGC ATCGGCCTGT CGGTGAGCCA GGAGGTGCTG GTCAACTACG AGCTGGGTCG CACCGCGGCG GCTTTCCGTT CGGTGTTCGG CACCAACATC GGCATCGGCT CGCAAGGCAT CCTGATCGAC GGCACGCCCG AGCAGAAGGC CGATTACCTG CCCCGGGTCG CCAGCGGCGA GCTGATCATG TCGTTTGCGC TGACCGAGCC CGACGCCGGC ACCGACGCGG CCTCGCTCAA GACCCGCGCC GAGCTCGACG GTGACCACTA CATCCTCAAC GGCACCAAGC GCTTCATCAC CAACGCGCCG CGCGCCGGCG CCTTCACGCT GATGGCGCGC ACCGGCGGGC CGGGCGCGGG CGGCGTGTCG TCCTTCATCG TGCCGGCCGG CCTGCCGGGC CTCAAGCTCG GCAAGCCCGA CAAGAAGATG GGCCAGCGCG GCACCAAGAC CTGCGACGTG ATCCTGGAGA ACGTGCGCGT GCCGGCGGCC AACATCATCG GCGGCGTGCC GGGGCAGGGC TTCAAGACCG CGATGAAGGT GCTCGACCGC GGCCGCCTCA ACATCTCGGC CGTGTCCTGC GGCCTGGCCT CGCGCATCAT CGACGAGTCG CGCCGCTATG CGCGCGAGCG CAAGCAGTTC GGCAAGGCCA TCGGCGAGTT CCAGCTGATC CAGGCCATGC TGGCCGACAG CCAGGCCGAG ATGCTGGCCG GCTGGTCGCT GGTCAAGGAC GTGGCCCTGC GCTTCGACGC CAAGCCGGCC CATGTGTCGG ACCCGGACGT CTCGATGCGC GTGTCCTGTG CCAAGCTGTT CGCCACCGAG ATGGTGGGCC GCGTGGCCGA CCGCGGCGTG CAGATCCACG GTGGCGCCGG CTACATCAAC GAATACCCGG TGGAACGTTT CTACCGCGAT GCCCGCCTGC TGCGCCTGTA CGAAGGCACG ACGCAGGTCC AGCAGATCAT CATCGGCCGC GAGCTGATCA GCCGCGACTG A
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Protein sequence | MAIDTESFDL LLASVQRFIR ERLVPAENAV EEHDEVPADI IEDMKEMGLF GLTVPEEYGG IGLSVSQEVL VNYELGRTAA AFRSVFGTNI GIGSQGILID GTPEQKADYL PRVASGELIM SFALTEPDAG TDAASLKTRA ELDGDHYILN GTKRFITNAP RAGAFTLMAR TGGPGAGGVS SFIVPAGLPG LKLGKPDKKM GQRGTKTCDV ILENVRVPAA NIIGGVPGQG FKTAMKVLDR GRLNISAVSC GLASRIIDES RRYARERKQF GKAIGEFQLI QAMLADSQAE MLAGWSLVKD VALRFDAKPA HVSDPDVSMR VSCAKLFATE MVGRVADRGV QIHGGAGYIN EYPVERFYRD ARLLRLYEGT TQVQQIIIGR ELISRD
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