| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1125 |
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| Symbol | |
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| ID | 6163739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1203474 |
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| End bp | 1205429 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641663879 |
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| Product | DNA mismatch repair protein MutL |
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| Protein accession | YP_001790159 |
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| Protein GI | 171057810 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
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| TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.279862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGC CCCCGTCCAC CGCGTCCGGC GCCACGCGCC GCGCCATCCG CGAACTGCCC
GACGAGCTGA TCAGCCAGAT CGCCGCCGGC GAGGTGATCG AGCGCCCCGG CTCGGTGGTG
CGCGAGCTGC TCGACAACGC GCTCGACGCC GGCGCGCGCC AGATCACGCT GCGACTGGCC
GCCGGCGGCG TGCGCGCGAT CCTGGTCGAG GACGACGGCG CCGGCATCCC CGCCGACGAA
CTGCCGCTGG CCCTCAAGCG CCACGCCACC AGCAAGATCA CGAGCCTGCA CGACCTGGAG
CAGGTCGGCA CGATGGGCTT CCGCGGCGAG GCGCTGGCGG CGCTGGGCGC GGTGGCCGAA
CTGGCCATCA CCAGCCGCAC CGCCGACAGC GCGCACGCGA TGCGCATCGA CGCCCGCAGC
GGCGAGCTGG CACCGGCGGC GCGCTCGGTC GGCACCACGG TCGAGGTGCG CGAGCTGTTC
TTCGCCACGC CGGCGCGGCG CAAGTTCTTG AAGACCGACG CCACCGAGCT GGCGCACTGC
CTCGAAGCGG TGCGCCGCCA CGCGCTGGCG CGGCCTGCGG TGGCGTTTGC GGTCTGGCAC
GAAGGCCGGC TGCTCGAACA GTGGCGCGCC GGCACGCCCG AGCAGCGTGT GCGCGACGTG
CTGGGCGAGG AGTTCATCGC CGCCAGCCGC GAGGTCACGG CGCAGGCCGG CCCGCTGCAG
GTCTACGGCC GCGTCGGCCT GCCCGAGGCC GCCCGCGCCC GCGCCGACCT GCAATACGCC
TACGTCAACG GCCGCCACGT GCGCGACCGG CTGGTCGCCC ACGGCGTGCG CTCGGCCTAC
GAGGACGTGC TGCACGGCAG CCGCCAGCCC AGCTACGTGC TGTTCGTCGA CGTGCCGCCG
GAGCGGGTCG ACGTCAACGT GCATCCGACC AAGAGCGAGG TGCGTTTCCG CGACTCGCGC
GAGGTGCACC AGGCGCTGCG CCGCTCGGTC GAGGCCGCGC TGGCGCTGCC GCGGCTGCAC
GAGGCCGGTG CTGCGCCGGC GGACGGACCG GCCGCCGTCG AGCCGACCGG GGCCCCGCCG
AACGCACCGA TCGATCGCAA CCCCGACGTC TGGACCGGCA ACCCGACCGC GTCGACTGCA
TCAACCGCCT GGCGCGCGCC CTACCCGGTG CAAGGCAGCC TCGCGCTGCA GCAGGCGGCG
CAACTGCATG CGCGCGAGAT GCCGCCGGGC TTCTCCGGTT CACCCGGCTA CTCAACGGCG
CCGAGCGGCG ATCCGGCCAC GGCCTTCCCG CTGCGCACCG ACCACGCCGC CGTCGATCCG
CAAGACGAGT GGCCGCTCGG CCGCGCGCTG GCGCAACTGG GCGGCGCCTA CGTGCTGGCG
GAAAACCGCC GCGGGCTGGT GATCGTCGAC ATGCACGCGG CGCACGAGCG CATCGTCTAC
GAGCGGCTCA AGCAGAGCCT GGCGTCACGA CGCGGCGCGG CTGAAGGCAA CGAAAACGGC
GCGCCGGGCA TCGAGGCTCA GCCGATGCTG ATCCCGGCCA CCTTCGCCGC CACGCCGACC
GAGATCGCCA CCGCCGAGGT GCACGCGGCC ACGCTGCTGC AGCTGGGCCT CGACCTGACG
CCGCTGTCGG CCGGCGTGCT GGCGCTGCGT TCGCGCCCGG CCGCGCTGCG TGATGCCGAC
CCGGTGGCGC TGGCGCGCTC GGTGCTGGCC GAACTCGGCC AGAGCGCCAC CGGCGAGGCC
AGCACGCTGG TGCAGCGCGC GCACGACGAG ATCCTGGCCA CGATGGCCTG CCACGGCGCG
GTGCGCGCCA ACCGGCGCCT GACACTCGAA GAGATGAACG CGCTGCTGCG CGACATGGAA
ACCACCGACC GCGCCGACCT GTGCAACCAC GGCCGACCGA CCTGGCGTCA GGTCACGCTG
CGCGAGCTCG ACACGCTGTT CCTGCGCGGG CGCTGA
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| Protein sequence | MTLPPSTASG ATRRAIRELP DELISQIAAG EVIERPGSVV RELLDNALDA GARQITLRLA
AGGVRAILVE DDGAGIPADE LPLALKRHAT SKITSLHDLE QVGTMGFRGE ALAALGAVAE
LAITSRTADS AHAMRIDARS GELAPAARSV GTTVEVRELF FATPARRKFL KTDATELAHC
LEAVRRHALA RPAVAFAVWH EGRLLEQWRA GTPEQRVRDV LGEEFIAASR EVTAQAGPLQ
VYGRVGLPEA ARARADLQYA YVNGRHVRDR LVAHGVRSAY EDVLHGSRQP SYVLFVDVPP
ERVDVNVHPT KSEVRFRDSR EVHQALRRSV EAALALPRLH EAGAAPADGP AAVEPTGAPP
NAPIDRNPDV WTGNPTASTA STAWRAPYPV QGSLALQQAA QLHAREMPPG FSGSPGYSTA
PSGDPATAFP LRTDHAAVDP QDEWPLGRAL AQLGGAYVLA ENRRGLVIVD MHAAHERIVY
ERLKQSLASR RGAAEGNENG APGIEAQPML IPATFAATPT EIATAEVHAA TLLQLGLDLT
PLSAGVLALR SRPAALRDAD PVALARSVLA ELGQSATGEA STLVQRAHDE ILATMACHGA
VRANRRLTLE EMNALLRDME TTDRADLCNH GRPTWRQVTL RELDTLFLRG R
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