| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1120 |
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| Symbol | |
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| ID | 6162142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1196582 |
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| End bp | 1197535 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663874 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790154 |
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| Protein GI | 171057805 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.432341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTCC GACGCCTGAC CCTGATCGCC CTGCTTGCCG CGGCCTTGCC CGTGGCGGCG
CAGGAGTGGC CGAACAAGCC GCTGCGCATC GTCGTGCCCT ACCCGCCGGG CGGCTCGTCG
GACATCATCG CGCGCGCCAT CAGCGGGCCG CTGGGTGACG CGCTCAAGCA GACCGTGATC
GTCGAGAACA AGCCCGGCGC CAACGGCAAC ACCGGCACCG ACTTCGTCGC CAAGGCCAAC
GACGGCCACA CGCTGCTGCT GTGCGACGTG GGCGCGCTGG CGATCACCGC GTCGGTCTAC
GCCAAGCTGC CTTTCGATCC GTCGAAGGAC CTGCGCGGCG TGGCCATGCT GGCCTATTCG
CCGCACCTGC TGGTGGTGCA CCCGTCGGTG CCGGCCAACA ACCTGCAGGA ACTGGTGGCG
CTGTCGAAGA AGACGCCGCT CAACTTTGCC GTCACCGCCA TCGGCAGCGC GCCGCACCTG
GCCGGCGTGG CGGTCGAGAA GGCCACCGGC GCGCAGTGGC AGTACATCCC GTACAAGGGC
GGCTCGCAGG CCATCGGCGA CACGGTGGCC GGCCAGACGC AGGTGCTGAT GAACGGCATG
CTCGCCACCC TGCCGCACGT GCAGTCGGGC AAGCTGAAGG TGCTGGGGGT GTCCAAGTCG
ACGCGCGTGC CGCTGCTGGC GCAGGTGCCG ACCATCGCCG AGCAGGGCGT GAAGGGCTTC
GAGTCGGGCA CCTGGCAAGG CCTGCTGGTG CCCGCGGGCA TGCCGGCCGC GCAGGTCACG
CGGCTCAATG CCGAGCTGAC CCGCATCATC CGTTCGCCCG AGGTGCGCGA GCGCCTGGTG
TCGCAGGGCG CCGAGGTCTA CACCATGTCG CCGACCGAGT TCGGCAGCTT CTTCGAGCGC
GAGCGCAAGA GCTGGGCGAA GGTCGTCGCC CAGGGCGGCG TCAAGATCGA TTGA
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| Protein sequence | MNFRRLTLIA LLAAALPVAA QEWPNKPLRI VVPYPPGGSS DIIARAISGP LGDALKQTVI
VENKPGANGN TGTDFVAKAN DGHTLLLCDV GALAITASVY AKLPFDPSKD LRGVAMLAYS
PHLLVVHPSV PANNLQELVA LSKKTPLNFA VTAIGSAPHL AGVAVEKATG AQWQYIPYKG
GSQAIGDTVA GQTQVLMNGM LATLPHVQSG KLKVLGVSKS TRVPLLAQVP TIAEQGVKGF
ESGTWQGLLV PAGMPAAQVT RLNAELTRII RSPEVRERLV SQGAEVYTMS PTEFGSFFER
ERKSWAKVVA QGGVKID
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