| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1104 |
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| Symbol | |
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| ID | 6160597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1177088 |
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| End bp | 1178767 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663858 |
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| Product | Na/Pi-cotransporter II-related protein |
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| Protein accession | YP_001790138 |
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| Protein GI | 171057789 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1283] Na+/phosphate symporter |
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| TIGRFAM ID | [TIGR00704] Na/Pi-cotransporter
[TIGR01013] Phosphate:Na+ Symporter (PNaS) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.178797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCACC TGCTCAATCT CCTGGCCGCC ATCGCCCTGC TGGTGTGGGC GACCCAGATC
GTGCGCACCG GCGTGCTGCG CCTGTTCGGC GAAGACCTGC GCCGGATGCT CGCCGCCAGC
ATGGGCGCCT GGCCCAAGGC GATGCTGGCG GGCCTGGGCG TGACCTGCCT GGTGCAGTCG
AGCACCGCCA CCGCGCTGAT CGTGTCGTCG TTCGTCGGTC GCGGCCTGGT GGCCACCGCG
CCGGCGCTGG TGGTGATGCT GGGCGCCGAT GTCGGCACCA GTGTGATGGC GCTGGTCTAC
TCGTTCGACC TGTCGTGGCT GTCGCCGCTG CTGATCTTCA TGGGCGTGAT CACCTACGTG
TCGCGCGAGA AGACCAGCAC CGGCCGGGTC GGCCAGATCT CGATCGGCCT GGGCCTGATC
ACGCTGGCGC TGCAGCTGAT CGTCGCCAAC ACCGGGCCGC TGGTGCAGGC GCCGCTGGTG
CGCACGCTGC TGGTCACGCT GCCCAACGAC CTGCCGATGG AGCTGCTGGT CGGCGCCTTG
CTTGCGATGG CCAGCTATTC GAGCCTGGCC GTCGTGCTGC TGGTGGCGAC GCTGGCCGAC
CAGGGCCTGG TGCCGGTGCC GACCGCGCTG GGCCTGGTGC TGGGCGCCAA CATCGGCCGC
GCGGCGGTGT CGATGCTGTC GGTCTGGCGC TCCGATGTCG CCACCCGTCG GCTGCCGCTG
GGCAACCTGC TGTTCAAGGG GCTGGCGGTG CTGCTGATCG CGCCGTTCCT GGGCCTGGTG
CACGTCTGGC TGCAGGACGG CATCGGCGTG GTGCTGATGC AGGTGGTGCT GTTCAACCTG
GCGTTCAACG CCGCGCAGGC GATCCTGTTC GTGCCCTTCA CCGGCCTGCT GGCCGCTGCG
CTGGAGCGCT GGCTGAAGGT GCCGCCCAGC ACCGACGATC GCGCGCCGCG CCACCTCGAC
AAGCTCGCGC TCGGCACGCC GTCGATCGCG CTGAGCTGCG CCGCCCGCGA GGCGCTGCGC
CAGGCCGATG CGGTCGAGAC CATGCTGCGC GGCGTGCTGC CGGTGATCCG CAACAACGAC
CTCGATCTGG CCGCCCGGCT GCGCCAGATG GAAGAAGTGG TCGACGCGCT CTACACCGCC
ATCAAGCTCT ACCTGACGCA GGTCTCGCGC ACCGCCTTGT CCGAGCGCGA GAGCCAGCGC
TGGACCGAGA TCGTCTCGTT CACGATCAAC ATGGAGCAGA TCGGCGACAT CATCGAGCGC
GTGCTGCAGG ACGTCGAGGA CAAGAAGATC CGCAAGCAGC GCAGCTTCTC GGACGCCGGC
ATGGCCGAGA TCACGCACCT GCACGAGCGC CTGCTCGCCA ATCTGCGGCT GGGCATGAGC
GTGTTCCTCG ACGGCCATGT GCGCGATGCG CAGAAGCTGC TCGAGGAGAA GGCGCGCTTT
CGCGAGCTGG AGCACGAATA CGCCTCCACC CACCTGAACC GGCTGCAGGA CAACACCGCC
GCCAGCATCG AGACCAGCTC GCTGCACCTC GACCTGATCA GCGAGCTCAA GCGCATCAAC
TCGCACATCT GCTCGATCGC CTACCCGATC CTCGAACCCG CCGGCGCGCT GACGCCGACG
CGGCTGCGCG CCTCGCGCAT GGGCGGGCTG GACGAAGAGG TGCGGGCGCA CGCCCGCTGA
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| Protein sequence | MLHLLNLLAA IALLVWATQI VRTGVLRLFG EDLRRMLAAS MGAWPKAMLA GLGVTCLVQS
STATALIVSS FVGRGLVATA PALVVMLGAD VGTSVMALVY SFDLSWLSPL LIFMGVITYV
SREKTSTGRV GQISIGLGLI TLALQLIVAN TGPLVQAPLV RTLLVTLPND LPMELLVGAL
LAMASYSSLA VVLLVATLAD QGLVPVPTAL GLVLGANIGR AAVSMLSVWR SDVATRRLPL
GNLLFKGLAV LLIAPFLGLV HVWLQDGIGV VLMQVVLFNL AFNAAQAILF VPFTGLLAAA
LERWLKVPPS TDDRAPRHLD KLALGTPSIA LSCAAREALR QADAVETMLR GVLPVIRNND
LDLAARLRQM EEVVDALYTA IKLYLTQVSR TALSERESQR WTEIVSFTIN MEQIGDIIER
VLQDVEDKKI RKQRSFSDAG MAEITHLHER LLANLRLGMS VFLDGHVRDA QKLLEEKARF
RELEHEYAST HLNRLQDNTA ASIETSSLHL DLISELKRIN SHICSIAYPI LEPAGALTPT
RLRASRMGGL DEEVRAHAR
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