| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1073 |
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| Symbol | |
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| ID | 6162343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1143304 |
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| End bp | 1144245 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641663827 |
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| Product | hypothetical protein |
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| Protein accession | YP_001790107 |
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| Protein GI | 171057758 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1512] Beta-propeller domains of methanol dehydrogenase type |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCCC ATCGTCGGTT CGATCGGTCC GGCCGACTCG CCACCTGGCT GGCCCTGCTG
CTGAGCCTCT GGCTGACGCT CGACAGCACG CCCGCACGCG CGCAGGACGT GCAGCCGGTG
CCCGCGCTGA CCGGCCACCT GATCGACCAG GCGGCGCTGC TCGACCCGCA GCAGCGCAGC
GCCATCGAGG CCCGGCTCAC GGCCATCGAG ACCGAGCTCG GCACCCAGAT GGTGGTGCTG
ATCGTCGCCA CCACGCAGCC CGAGGACATC GCCAGCTACG CCCAGCGCGT GGCCGACAGC
TGGAAGATCG GCCGCCGCGA CATCGGCGAC GGCCTGCTGC TGGTGGTCGC CAGCGCCGAC
CGGCGCATGC GCATCGAGGT CGCCAAGACG CTCGAAGGCG CGATCCCCGA CCTGGCGGCC
AGGCGGGTGA TCGACAGCGC GCTCACGCCG GCCTTCAAGC GCGGCGACTT CGCCGGCGGC
ATCGGCCAGG GCATCGAGCA GCTGCGCGCG CTGGTCAAGG GCGAGGCACT GCCGGCACCG
CAACCGCGTG GCGCCGAAGG CAACGCCGGC ATCGACTGGG AGTCGCTGGC GATGCTGGCC
TTCGTCGGCG TGCCGATCAT CGCCAAGACG CTGTCGGACC TGTTCGGCCG CAAGCTCGGC
CCGGTGCTGA CGGCCGGGGG TGTCGGCACG CTCGCCTGGA TCCTGTCGAC CAGCCTGGTG
CTGGCGGTGG TGGCCGGGCT GCTCGGCCTG CTGGTGGCGC TGTTTGCCGG CGCCTTCAGC
ACGTTGCAGT CGGCCGGCGG ACGCGGTCGA CGCGGCGGCT GGGGTGGCCC GGGTGGCGGC
CTCGGCGGCG GTGGTGGCTG GGGTGGAGGC GGGGGCGGCG GCGGCTTCCG CTCGGGCGGC
GGCGGCAATT TTGGCGGCGG CGGCGCCTCC GGGAGCTGGT GA
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| Protein sequence | MTAHRRFDRS GRLATWLALL LSLWLTLDST PARAQDVQPV PALTGHLIDQ AALLDPQQRS
AIEARLTAIE TELGTQMVVL IVATTQPEDI ASYAQRVADS WKIGRRDIGD GLLLVVASAD
RRMRIEVAKT LEGAIPDLAA RRVIDSALTP AFKRGDFAGG IGQGIEQLRA LVKGEALPAP
QPRGAEGNAG IDWESLAMLA FVGVPIIAKT LSDLFGRKLG PVLTAGGVGT LAWILSTSLV
LAVVAGLLGL LVALFAGAFS TLQSAGGRGR RGGWGGPGGG LGGGGGWGGG GGGGGFRSGG
GGNFGGGGAS GSW
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